CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART01G20190
(
Oryza barthii
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
OBART01G20190
T245528_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART01G20190.1
LOB
81
182
AEAAMRHLQGAEDGVLAGVPARVILHGDEKVRLLNAQRLFGTRNIRHFVQATLPEKQDDLMSSIKYEAQVWARNPQSCATGVMWHLERKVERELAKLSKLRQ
Links
Other
LOB
family TFs
Other
Oryza barthii
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_04245
Phytophthora parasitica
F443_04245
N
0.000
fgenesh_masked-piw_contig_2465-abinit-gene-0.3
Pythium iwayamai
fgenesh_masked-piw_contig_2465-abinit-gene-0.3
N
0.000
fgenesh_scip_prom.28083.3669
Phytophthora lateralis
fgenesh_scip_prom.28083.3669
N
0.000
fgenesh_scip_prom.46568.5994
Phytophthora kernoviae
fgenesh_scip_prom.46568.5994
N
0.000
HpaG801013
Hyaloperonospora arabidopsidis
HpaG801013
N
0.000
HpaG811874
Hyaloperonospora arabidopsidis
HpaG811874
N
0.000
maker-pag1_scaffold_4-snap-gene-0.57
Pythium aphanidermatum
maker-pag1_scaffold_4-snap-gene-0.57
N
0.000
maker-pve_contig_182-fgenesh-gene-0.7
Pythium vexans
maker-pve_contig_182-fgenesh-gene-0.7
N
0.000
Phyra72797
Phytophthora ramorum
Phyra72797
N
0.000
Physo142553
Phytophthora sojae
Physo142553
N
0.000
PYU1_G004133
Pythium ultimum
PYU1_G004133
N
0.000
estExt_Genewise1Plus.C_10167
Phytophthora capsici
estExt_Genewise1Plus.C_10167
N
0.000