CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0005s15670
(
Populus trichocarpa
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
POPTR_0005s15670
T245870_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0005s15670.1
LOB
4
106
SCNGCRVLRKGCSENCSIRPCLQWIKSSESQANATVFLAKFYGRAGLMNLINAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLMWSGSWQLCQAAVEAVLKG
POPTR_0005s15670.2
LOB
4
106
SCNGCRVLRKGCSENCSIRPCLQWIKSSESQANATVFLAKFYGRAGLMNLINAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLMWSGSWQLCQAAVEAVLKG
Links
Other
LOB
family TFs
Other
Populus trichocarpa
TFs
202 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDOA012880
Musca domestica
MDOA012880
I
GA16207
Drosophila pseudoobscura
FBgn0076223
N
GH21728
Drosophila grimshawi
FBgn0129189
N
GI20675
Drosophila mojavensis
FBgn0143410
N
GL22941
Drosophila persimilis
FBgn0160531
N
GJ20425
Drosophila virilis
FBgn0207565
N
LCUP018208
Lucilia cuprina
LCUP018208
N