CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_019459
(
Theobroma cacao
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
TCM_019459
T246128_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY04201
LOB
4
107
SCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGA
Links
Other
LOB
family TFs
Other
Theobroma cacao
TFs
230 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARG81
Saccharomyces cerevisiae
YML099C
D
ZBAI_08687
Zygosaccharomyces bailii
ZBAI_08687
I
PGUG_03209
Meyerozyma guilliermondii
PGUG_03209
I
PICST_51603
Scheffersomyces stipitis
PICST_51603
I
SKUD_195006
Saccharomyces kudriavzevii
SKUD_195006
I
SPAPADRAFT_69629
Spathaspora passalidarum
SPAPADRAFT_69629
I
SU7_2431
Saccharomyces arboricola
SU7_2431
I
TDEL_0B00480
Torulaspora delbrueckii
TDEL_0B00480
I
TRIATDRAFT_141953
Trichoderma atroviride
TRIATDRAFT_141953
I
ZBAI_03002
Zygosaccharomyces bailii
ZBAI_03002
I
PGUG_03209
Candida guilliermondii
PGUG_03209
I
ZYRO0A00440g
Zygosaccharomyces rouxii
ZYRO0A00440g
I
e_gww1.1.1.1491.1
Pichia stipitis
e_gww1.1.1.1491.1
I
Scas_Contig626.6
Saccharomyces castellii
Scas_Contig626.6
I
16040_YML099C
Saccharomyces mikatae
16040_YML099C
I
17710_YML099C
Saccharomyces paradoxus
17710_YML099C
I
18194_YML099C
Saccharomyces bayanus
18194_YML099C
I
KLTH0E16500g
Kluyveromyces thermotolerans
KLTH0E16500g
I
Kwal_9688
Kluyveromyces waltii
Kwal_9688
I
Ecym_8159
Eremothecium cymbalariae
Ecym_8159
I
CPAG_00315
Candida parapsilosis
CPAG_00315
I
AACERI_AaceriAAL175W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAAL175W
I
AGOS_AAL175W
Ashbya gossypii
AGOS_AAL175W
I
CaO19.10262
Candida albicans
CaO19.10262
I
CaO19.2748
Candida albicans
CaO19.2748
I
CD36_42420
Candida dubliniensis
CD36_42420
I
CORT_0E00270
Candida orthopsilosis
CORT_0E00270
I
CTRG_00138
Candida tropicalis
CTRG_00138
I
DEHA2E16302g
Debaryomyces hansenii
DEHA2E16302g
I
NCAS_0C00220
Naumovozyma castellii
NCAS_0C00220
I
G210_1017
Candida maltosa
G210_1017
I
GNLVRS01_PISO0M20692g
Millerozyma farinosa
GNLVRS01_PISO0M20692g
I
GNLVRS01_PISO0N20935g
Millerozyma farinosa
GNLVRS01_PISO0N20935g
I
KAFR_0L02130
Kazachstania africana
KAFR_0L02130
I
KLLA0_D10197g
Kluyveromyces lactis
KLLA0_D10197g
I
KLTH0E16500g
Lachancea thermotolerans
KLTH0E16500g
I
KNAG_0J00210
Kazachstania naganishii
KNAG_0J00210
I
Kpol_538p52
Vanderwaltozyma polyspora
Kpol_538p52
I
fgenesh1_pg.sca_9_chr7_10_0000051
Nectria haematococca
fgenesh1_pg.sca_9_chr7_10_0000051
N
NechaG82527
Fusarium solani
NechaG82527
N