Ca_02125 (Cicer arietinum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Ca_02125 T246281_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD6
M06955_2.00 		Arabidopsis thaliana
CGSCGGNDDHDRCGGMGRHDN
NHDYCKCCGYHDHHNCCGSCG		 Dap-seq
OMalley et al.(2016)
AS2_col_a 		0.768 0.768
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_02125 LOB 8 106

Links

Other LOB family TFs
Other Cicer arietinum TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSOANG00000014327 Ornithorhynchus anatinus ENSOANG00000014327 I
AAEL014151 Aedes aegypti AAEL014151 N
ENSP00000216513-D1 Bos grunniens ENSP00000216513-D1 N
ENSP00000216513 Macaca fascicularis ENSP00000216513 N
SNAPOd2T00003146001 Oikopleura dioica SNAPOd2T00003146001 N
ADIR001850 Anopheles dirus ADIR001850 N
AMIN008765 Anopheles minimus AMIN008765 N
ASTEI11594 Anopheles stephensi ASTEI11594 N
PPAI009697 Phlebotomus papatasi PPAI009697 N
ACAC_0000073601 Angiostrongylus cantonensis ACAC_0000073601 N
ECPE_0000004201 Echinostoma caproni ECPE_0000004201 N
HCOI00435100 Haemonchus contortus HCOI00435100 N
PXEA_0002543701 Protopolystoma xenopodis PXEA_0002543701 N
scaffold376-EXSNAP2012.2 Pristionchus exspectatus scaffold376-EXSNAP2012.2 N
SCUD_0001736701 Schistosoma curassoni SCUD_0001736701 N
SMTD_0000732001 Schistosoma mattheei SMTD_0000732001 N