Bostr.0556s0333 (Boechera stricta)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Bostr.0556s0333 T246660_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD23
M06964_2.00 		Arabidopsis thaliana
NGCGNDRAWNNCGCN
NGCGNNWTYHNCGCN		 Dap-seq
OMalley et al.(2016)
LBD23_col_a 		0.939 0.939
LBD23
M06965_2.00 		Arabidopsis thaliana
DGCGDDRRWNNCGCN
NGCGNNWYYHHCGCH		 Dap-seq
OMalley et al.(2016)
LBD23_colamp_a 		0.939 0.939
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.0556s0333.1.p LOB 5 103

Links

Other LOB family TFs
Other Boechera stricta TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LOAG_15534 Loa loa LOAG_15534 N 0.000
ACAC_0000008501 Angiostrongylus cantonensis ACAC_0000008501 N 0.000
nDi.2.2.2.g12190 Dirofilaria immitis nDi.2.2.2.g12190 N 0.000
nOo.2.0.1.g11935 Onchocerca ochengi nOo.2.0.1.g11935 N 0.000
OESDEN_24323 Oesophagostomum dentatum OESDEN_24323 N 0.000
SVUK_0002052401 Strongylus vulgaris SVUK_0002052401 N 0.000
TCNE_0000897001 Toxocara canis TCNE_0000897001 N 0.000