CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.1013s0013
(
Capsella grandiflora
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Cagra.1013s0013
T246717_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1013s0013.1.p
LOB
12
111
ACAACKYQRKKCTKDCVLAPYFPQDRPKQFLNSHKLFGVSNITKMIKKVDESQRDIAMQNLIFHANARALDPVGGVYRIVCDLKRKIECCQAELNFTLQQ
Links
Other
LOB
family TFs
Other
Capsella grandiflora
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PMAA_021440
Talaromyces marneffei
PMAA_021440
N
S40285_08109
Stachybotrys chlorohalonata
S40285_08109
N
S40288_01750
Stachybotrys chartarum
S40288_01750
N
THITE_2050737
Thielavia terrestris
THITE_2050737
N
Pc16g07770
Penicillium chrysogenum
Pc16g07770
N
PMAA_021440
Penicillium marneffei
PMAA_021440
N