Cagra.1671s0410 (Capsella grandiflora)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Cagra.1671s0410 T246728_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1671s0410.1.p LOB 32 130

Links

Other LOB family TFs
Other Capsella grandiflora TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PBX3 Homo sapiens ENSG00000167081 D
PBX1 Homo sapiens ENSG00000185630 D
PBX2 Homo sapiens ENSG00000204304 D
Pbx2 Mus musculus ENSMUSG00000034673 D
Pbx1 Mus musculus ENSMUSG00000052534 D
pbx4 Tetraodon nigroviridis ENSTNIG00000018555 D
EFV58423 Trichinella spiralis EFV58423 I
PBX1 Anolis carolinensis ENSACAG00000005840 I
PBX2 Anolis carolinensis ENSACAG00000012549 I
ENSAMEG00000002519 Ailuropoda melanoleuca ENSAMEG00000002519 I
ENSAMEG00000006543 Ailuropoda melanoleuca ENSAMEG00000006543 I
ENSAMXG00000017567 Astyanax mexicanus ENSAMXG00000017567 I
ENSAPLG00000002733 Anas platyrhynchos ENSAPLG00000002733 I
ENSAPLG00000004073 Anas platyrhynchos ENSAPLG00000004073 I
PBX3 Bos taurus ENSBTAG00000013314 I
PBX1 Bos taurus ENSBTAG00000013801 I
PBX2 Bos taurus ENSBTAG00000014421 I
PBX2 Canis familiaris ENSCAFG00000000783 I
PBX1 Canis familiaris ENSCAFG00000013289 I
PBX3 Canis familiaris ENSCAFG00000020175 I
PBX1 Choloepus hoffmanni ENSCHOG00000007502 I
pbx Ciona intestinalis ENSCING00000009075 I
PBX2 Callithrix jacchus ENSCJAG00000001886 I
PBX1 Callithrix jacchus ENSCJAG00000004712 I
PBX3 Callithrix jacchus ENSCJAG00000007020 I
NOTCH4 Cavia porcellus ENSCPOG00000000591 I
PBX3 Cavia porcellus ENSCPOG00000004530 I
PBX1 Cavia porcellus ENSCPOG00000005958 I
ENSCSAG00000009322 Chlorocebus sabaeus ENSCSAG00000009322 I
ENSCSAG00000010678 Chlorocebus sabaeus ENSCSAG00000010678 I
ENSCSAG00000013655 Chlorocebus sabaeus ENSCSAG00000013655 I
ENSCSAVG00000001721 Ciona savignyi ENSCSAVG00000001721 I
pbx3b Danio rerio ENSDARG00000013615 I
pbx4 Danio rerio ENSDARG00000052150 I
pbx3a Danio rerio ENSDARG00000089262 I
pbx1a Danio rerio ENSDARG00000100494 I
pbx1b Danio rerio ENSDARG00000101131 I
PBX1 Dasypus novemcinctus ENSDNOG00000035929 I
PBX2 Dasypus novemcinctus ENSDNOG00000042174 I
PBX3 Dasypus novemcinctus ENSDNOG00000043756 I
Pbx2 Dipodomys ordii ENSDORG00000009932 I
Pbx1 Dipodomys ordii ENSDORG00000012241 I
PBX2 Equus caballus ENSECAG00000003887 I
PBX1 Equus caballus ENSECAG00000013058 I
PBX1 Erinaceus europaeus ENSEEUG00000008155 I
PBX2 Erinaceus europaeus ENSEEUG00000014386 I
ENSFALG00000002211 Ficedula albicollis ENSFALG00000002211 I
ENSFALG00000007934 Ficedula albicollis ENSFALG00000007934 I
PBX2 Felis catus ENSFCAG00000004530 I
ENSFCAG00000005533 Felis catus ENSFCAG00000005533 I
PBX3 Felis catus ENSFCAG00000014463 I
PBX1 Gasterosteus aculeatus ENSGACG00000003964 I
pbx4 Gasterosteus aculeatus ENSGACG00000010133 I
pbx3b Gasterosteus aculeatus ENSGACG00000011999 I
PBX1 Gasterosteus aculeatus ENSGACG00000013411 I
PBX1 Gallus gallus ENSGALG00000003429 I
PBX2 Gorilla gorilla ENSGGOG00000002325 I
PBX1 Gorilla gorilla ENSGGOG00000011303 I
ENSLACG00000012535 Latimeria chalumnae ENSLACG00000012535 I
PBX2 Loxodonta africana ENSLAFG00000010860 I
PBX1 Loxodonta africana ENSLAFG00000015741 I
ENSMEUG00000015905 Macropus eugenii ENSMEUG00000015905 I
PBX1 Microcebus murinus ENSMICG00000001280 I
PBX2 Microcebus murinus ENSMICG00000001829 I
ENSMLUG00000000548 Myotis lucifugus ENSMLUG00000000548 I
PBX2 Macaca mulatta ENSMMUG00000018456 I
PBX1 Macaca mulatta ENSMMUG00000019108 I
PBX1 Monodelphis domestica ENSMODG00000001238 I
PBX2 Monodelphis domestica ENSMODG00000014873 I
ENSMPUG00000003773 Mustela putorius furo ENSMPUG00000003773 I
ENSMPUG00000010132 Mustela putorius furo ENSMPUG00000010132 I
ENSNLEG00000006632 Nomascus leucogenys ENSNLEG00000006632 I
ENSNLEG00000014662 Nomascus leucogenys ENSNLEG00000014662 I
ENSOARG00000000135 Ovis aries ENSOARG00000000135 I
ENSOARG00000011306 Ovis aries ENSOARG00000011306 I
PBX2 Oryctolagus cuniculus ENSOCUG00000016439 I
PBX1 Otolemur garnettii ENSOGAG00000000132 I
PBX2 Otolemur garnettii ENSOGAG00000016303 I
ENSONIG00000001875 Oreochromis niloticus ENSONIG00000001875 I
ENSONIG00000009796 Oreochromis niloticus ENSONIG00000009796 I
PBX2 Ochotona princeps ENSOPRG00000004407 I
PBX1 Ochotona princeps ENSOPRG00000006942 I
pbx4 Oryzias latipes ENSORLG00000006519 I
ENSPANG00000010493 Papio anubis ENSPANG00000010493 I
ENSPANG00000012912 Papio anubis ENSPANG00000012912 I
PBX2 Procavia capensis ENSPCAG00000012658 I
ENSPFOG00000007033 Poecilia formosa ENSPFOG00000007033 I
ENSPFOG00000007638 Poecilia formosa ENSPFOG00000007638 I
ENSPPYG00000000572 Pongo abelii ENSPPYG00000000572 I
ENSPPYG00000016486 Pongo abelii ENSPPYG00000016486 I
ENSPSIG00000018139 Pelodiscus sinensis ENSPSIG00000018139 I
PBX1 Pan troglodytes ENSPTRG00000001611 I
PBX2 Pan troglodytes ENSPTRG00000018012 I
PBX2 Pteropus vampyrus ENSPVAG00000005153 I
Pbx2 Rattus norvegicus ENSRNOG00000000440 I
Pbx1 Rattus norvegicus ENSRNOG00000004693 I
ENSSHAG00000010477 Sarcophilus harrisii ENSSHAG00000010477 I
ENSSHAG00000012750 Sarcophilus harrisii ENSSHAG00000012750 I
PBX2 Sus scrofa ENSSSCG00000001438 I
PBX1 Sus scrofa ENSSSCG00000006331 I
ENSSTOG00000011504 Ictidomys tridecemlineatus ENSSTOG00000011504 I
ENSSTOG00000014748 Ictidomys tridecemlineatus ENSSTOG00000014748 I
PBX1 Taeniopygia guttata ENSTGUG00000017317 I
pbx1b Tetraodon nigroviridis ENSTNIG00000006548 I
pbx1b Takifugu rubripes ENSTRUG00000007203 I
pbx4 Takifugu rubripes ENSTRUG00000014688 I
ENSTSYG00000012332 Tarsius syrichta ENSTSYG00000012332 I
PBX1 Tursiops truncatus ENSTTRG00000006085 I
PBX2 Tursiops truncatus ENSTTRG00000013787 I
ENSXMAG00000013399 Xiphophorus maculatus ENSXMAG00000013399 I
ENSXMAG00000016285 Xiphophorus maculatus ENSXMAG00000016285 I
HelroG87471 Helobdella robusta HelroG87471 I
ISCW023208 Ixodes scapularis ISCW023208 I
SMAR009718 Strigamia maritima SMAR009718 I
tetur07g02140 Tetranychus urticae tetur07g02140 I
Aan_R012003 Calypte anna Aan_R012003 I
Afo_R015814 Aptenodytes forsteri Afo_R015814 I
Alligator_sinensis_CCG010576.1 Alligator sinensis Alligator_sinensis_CCG010576.1 I
Cmyd_10020748 Chelonia mydas Cmyd_10020748 I
ENSBTAP00000018349-D1 Bos grunniens ENSBTAP00000018349-D1 I
ENSMMUP00000018094 Macaca fascicularis ENSMMUP00000018094 I
ENSP00000405890 Macaca fascicularis ENSP00000405890 I
Gfo_R012405 Geospiza fortis Gfo_R012405 I
Myotis_brandtii_Pbx1_10024321 Myotis brandtii Myotis_brandtii_Pbx1_10024321 I
Myotis_brandtii_PBX2_10007211 Myotis brandtii Myotis_brandtii_PBX2_10007211 I
Ogr09525 Ophisaurus gracilis Ogr09525 I
Ogr10509 Ophisaurus gracilis Ogr10509 I
Pvit_08914 Pogona vitticeps Pvit_08914 I
Pvit_18652 Pogona vitticeps Pvit_18652 I
Tal_R007899 Tyto alba Tal_R007899 I
Ocbimv22018840m.g Octopus bimaculoides Ocbimv22018840m.g I
Sakowv30029721m.g Saccoglossus kowalevskii Sakowv30029721m.g I
SNAPOd2T00029313001 Oikopleura dioica SNAPOd2T00029313001 I
pbx2 Xenopus tropicalis XB-GENE-484669 I
D917_00421 Trichinella nativa D917_00421 I
D918_01226 Trichuris suis D918_01226 I
SBAD_0001248701 Soboliphyme baturini SBAD_0001248701 I
TMUE_s0185001000 Trichuris muris TMUE_s0185001000 I
TTRE_0000478301 Trichuris trichiura TTRE_0000478301 I