CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_6.40
(
Carica papaya
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
evm.TU.supercontig_6.40
T246900_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_6.40
LOB
2
104
SCNGCRVLRKGCSESCILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPETQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRG
Links
Other
LOB
family TFs
Other
Carica papaya
TFs
267 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACUA002647
Anopheles culicifacies
ACUA002647
N
ASTEI04678
Anopheles stephensi
ASTEI04678
N
AQUA003889
Anopheles quadriannulatus
AQUA003889
N
AMIN010042
Anopheles minimus
AMIN010042
N
AMEM010038
Anopheles merus
AMEM010038
N
AMAM003160
Anopheles maculatus
AMAM003160
N
AFUN001840
Anopheles funestus
AFUN001840
N
AFAF012786
Anopheles farauti
AFAF012786
N
AEPI006876
Anopheles epiroticus
AEPI006876
N
ADIR003587
Anopheles dirus
ADIR003587
N
CpipJ_CPIJ004542
Culex pipiens
CpipJ_CPIJ004542
N
ACOM031669
Anopheles coluzzii
ACOM031669
N
AATE012769
Anopheles atroparvus
AATE012769
N
AARA009134
Anopheles arabiensis
AARA009134
N
AALB005283
Anopheles albimanus
AALB005283
N
CPIJ004542
Culex quinquefasciatus
CPIJ004542
N
AGAP006800
Anopheles gambiae
AGAP006800
N
ADAC004683
Anopheles darlingi
ADAC004683
N
AAEL009220
Aedes aegypti
AAEL009220
N