CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.011G064500
(
Gossypium raimondii
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Gorai.011G064500
T246995_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.011G064500.1
LOB
14
112
ACAACKYQRRKCAPDCILAPYFPHDRQRQFQNAHKLFGVSNITKIIKNLNPPEKDIAMRTIVFQSDARANDPVGGCYRIIQELQRQIEYSQAELDLVLH
Links
Other
LOB
family TFs
Other
Gossypium raimondii
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PFICI_13726
Pestalotiopsis fici
PFICI_13726
N
AB00088.1
Alternaria brassicicola
AB00088.1
N
fgenesh1_pg.sca_8_chr1_1_0000412
Nectria haematococca
fgenesh1_pg.sca_8_chr1_1_0000412
N
VDBG_03963
Verticillium alfalfae
VDBG_03963
N
VDAG_01189
Verticillium dahliae
VDAG_01189
N
SPBR_06366
Sporothrix brasiliensis
SPBR_06366
N
PV10_08424
Exophiala mesophila
PV10_08424
N
PTT_13765
Pyrenophora teres
PTT_13765
N
PTRG_10286
Pyrenophora triticirepentis
PTRG_10286
N
SNOG_09876
Stagonospora nodorum
SNOG_09876
N
NechaG74381
Fusarium solani
NechaG74381
N
HMPREF1624_07083
Sporothrix schenckii
HMPREF1624_07083
N
FPSE_11552
Fusarium pseudograminearum
FPSE_11552
N
FGRRES_01378
Fusarium graminearum
FGRRES_01378
N
FFUJ_01581
Fusarium fujikuroi
FFUJ_01581
N
F503_03119
Ophiostoma piceae uamh
F503_03119
N
CH063_03657
Colletotrichum higginsianum
CH063_03657
N
VDBG_03963
Verticillium albo atrum
VDBG_03963
N