CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000131978
(
Malus domestica
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
MDP0000131978
T247072_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000131978
LOB
28
81
VRPSRARACHVPAIFKSVLYEACGRIVNPTYGSVGMMWSGSWDQCQAAVDAVLE
Links
Other
LOB
family TFs
Other
Malus domestica
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONECUT1
Homo sapiens
ENSG00000169856
D
ENSSHAG00000018152
Sarcophilus harrisii
ENSSHAG00000018152
I
ONECUT1
Pan troglodytes
ENSPTRG00000007090
I
ENSLACG00000003028
Latimeria chalumnae
ENSLACG00000003028
N
ENSPMAG00000007938
Petromyzon marinus
ENSPMAG00000007938
N
onecut1
Takifugu rubripes
ENSTRUG00000000994
N
Cmyd_10014202
Chelonia mydas
Cmyd_10014202
N
Myotis_brandtii_Onecut1_10025993
Myotis brandtii
Myotis_brandtii_Onecut1_10025993
N
AMAM006920
Anopheles maculatus
AMAM006920
N
BTMF_0001093101
Brugia timori
BTMF_0001093101
N
EVEC_0000948201
Enterobius vermicularis
EVEC_0000948201
N