CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000200379
(
Malus domestica
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
MDP0000200379
T247090_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000200379
LOB
51
150
ACAACKHQRKKCAQDCPLAPHFPASKPQTFRNAHRLYGVSNIKTILKQIHDPQQKTDAVQSIVYESDMRAKFPVTGCLGIINQLNFQLQEAMKELYHVRT
Links
Other
LOB
family TFs
Other
Malus domestica
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MAM_00381
Metarhizium album
MAM_00381
N
estExt_fgenesh1_pm.C_sca_2_chr3_3_00071
Nectria haematococca
estExt_fgenesh1_pm.C_sca_2_chr3_3_00071
N
X797_008514
Metarhizium robertsii
X797_008514
N
VHEMI06572
Torrubiella hemipterigena
VHEMI06572
N
TRIVIDRAFT_115781
Trichoderma virens
TRIVIDRAFT_115781
N
TRIREDRAFT_111013
Trichoderma reesei
TRIREDRAFT_111013
N
TRIATDRAFT_219643
Trichoderma atroviride
TRIATDRAFT_219643
N
NechaG103657
Fusarium solani
NechaG103657
N
MBR_06926
Metarhizium brunneum
MBR_06926
N
MANI_025227
Metarhizium anisopliae
MANI_025227
N
BBA_03180
Beauveria bassiana
BBA_03180
N
MAJ_03430
Metarhizium majus
MAJ_03430
N
MAC_06654
Metarhizium acridum
MAC_06654
N
GLRG_06557
Colletotrichum graminicola
GLRG_06557
N
FVEG_02371
Fusarium verticillioides
FVEG_02371
N
FOXG_03505
Fusarium oxysporum
FOXG_03505
N
CSUB01_09286
Colletotrichum sublineola
CSUB01_09286
N
Cob_11092
Colletotrichum orbiculare
Cob_11092
N
CFIO01_06836
Colletotrichum fioriniae
CFIO01_06836
N