CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK28345.1
(
Cannabis sativa
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
PK28345.1
T247401_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK28345.1
LOB
21
49
SCAACKFLKRRCIPTCIFAPYFRSDEPKK
Links
Other
LOB
family TFs
Other
Cannabis sativa
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_022_00282
Aquilegia coerulea
Aquca_022_00282
I
0.000
cassava2515.valid.m1
Manihot esculenta
cassava2515.valid.m1
I
0.000
cassava2514.valid.m1
Manihot esculenta
cassava2514.valid.m1
I
0.000
cassava2513.valid.m1
Manihot esculenta
cassava2513.valid.m1
I
0.000
Si001354m.g
Setaria italica
Si001354m.g
N
0.000
Pavir.J18990
Panicum virgatum
Pavir.J18990
N
0.000
Pavir.J07259
Panicum virgatum
Pavir.J07259
N
0.000
Pavir.J02083
Panicum virgatum
Pavir.J02083
N
0.000
mgf025137m
Mimulus guttatus
mgf025137m
N
0.000
cassava43227.valid.m1
Manihot esculenta
cassava43227.valid.m1
N
0.000
cassava43226.valid.m1
Manihot esculenta
cassava43226.valid.m1
N
0.000
TRIUR3_22935
Triticum urartu
TRIUR3_22935
N
0.000
Traes_5AL_41B98AAEF
Triticum aestivum
Traes_5AL_41B98AAEF
N
0.000
Traes_1DL_F410CF9FD
Triticum aestivum
Traes_1DL_F410CF9FD
N
0.000
Traes_1BL_9018AA7BA
Triticum aestivum
Traes_1BL_9018AA7BA
N
0.000
Traes_1AL_C4FA8404A
Triticum aestivum
Traes_1AL_C4FA8404A
N
0.000
BGIOSGA018023
Oryza indica
BGIOSGA018023
N
0.000
Sb09g020880
Sorghum bicolor
Sb09g020880
N
0.000
OS05G0426200
Oryza sativa
OS05G0426200
N
0.000
ORUFI05G18410
Oryza rufipogon
ORUFI05G18410
N
0.000
ORGLA05G0148600
Oryza glaberrima
ORGLA05G0148600
N
0.000
OPUNC05G15090
Oryza punctata
OPUNC05G15090
N
0.000
ONIVA05G17930
Oryza nivara
ONIVA05G17930
N
0.000
OMERI05G14890
Oryza meridionalis
OMERI05G14890
N
0.000
OGLUM05G18240
Oryza glumaepatula
OGLUM05G18240
N
0.000
OBART05G17230
Oryza barthii
OBART05G17230
N
0.000
OB05G25040
Oryza brachyantha
OB05G25040
N
0.000
LPERR05G13650
Leersia perrieri
LPERR05G13650
N
0.000
GSMUA_Achr10G04530_001
Musa acuminata
GSMUA_Achr10G04530_001
N
0.000
GRMZM2G456568
Zea mays
GRMZM2G456568
N
0.000
GRMZM2G104400
Zea mays
GRMZM2G104400
N
0.000
BRADI2G24790
Brachypodium distachyon
BRADI2G24790
N
0.000