LPERR04G16420 (Leersia perrieri)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 LPERR04G16420 T249357_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.908 0.793
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.908 0.793
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR04G16420.1 MADF 107 178
LPERR04G16420.1 MADF 510 578

Links

Other MADF family TFs
Other Leersia perrieri TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
dmd-9 Caenorhabditis elegans WBGene00022060 D
CBG03381 Caenorhabditis briggsae CBG03381 I
CJA18545 Caenorhabditis japonica CJA18545 I
CRE30013 Caenorhabditis remanei CRE30013 I
CRE30014 Caenorhabditis remanei CRE30014 I
ACAC_0000297301 Angiostrongylus cantonensis ACAC_0000297301 I
ANCCAN_12400 Ancylostoma caninum ANCCAN_12400 I
CGOC_0001138001 Cylicostephanus goldi CGOC_0001138001 I
Hba_03543 Heterorhabditis bacteriophora Hba_03543 I
HCOI00493000 Haemonchus contortus HCOI00493000 I
HPBE_0000455001 Heligmosomoides bakeri HPBE_0000455001 I
NBR_0000615901 Nippostrongylus brasiliensis NBR_0000615901 I
NECAME_02595 Necator americanus NECAME_02595 I
SVUK_0000682301 Strongylus vulgaris SVUK_0000682301 I