Sb09g028350 (Sorghum bicolor)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Sb09g028350 T249776_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.838 0.647
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.838 0.647
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb09g028350.1 MADF 52 129

Links

Other MADF family TFs
Other Sorghum bicolor TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC08G18550 Oryza punctata OPUNC08G18550 N
Pavir.Fb01913 Panicum virgatum Pavir.Fb01913 N
Pavir.Fa00462 Panicum virgatum Pavir.Fa00462 N
TRIUR3_01970 Triticum urartu TRIUR3_01970 N
Traes_7DS_64B00DC40 Triticum aestivum Traes_7DS_64B00DC40 N
Traes_7AS_3BAA88E9E Triticum aestivum Traes_7AS_3BAA88E9E N
Si014054m.g Setaria italica Si014054m.g N
Si001226m.g Setaria italica Si001226m.g N
Sb07g027350 Sorghum bicolor Sb07g027350 N
OS08G0515800 Oryza sativa OS08G0515800 N
ORGLA08G0180600 Oryza glaberrima ORGLA08G0180600 N
BGIOSGA026683 Oryza indica BGIOSGA026683 N
OMERI02G02200 Oryza meridionalis OMERI02G02200 N
OLONG_027098 Oryza longistaminata OLONG_027098 N
OGLUM08G21650 Oryza glumaepatula OGLUM08G21650 N
OBART08G20380 Oryza barthii OBART08G20380 N
OB08G27280 Oryza brachyantha OB08G27280 N
MLOC_53939 Hordeum vulgare MLOC_53939 N
LPERR08G17220 Leersia perrieri LPERR08G17220 N
GRMZM2G113181 Zea mays GRMZM2G113181 N
F775_32365 Aegilops tauschii F775_32365 N
BRADI3G40280 Brachypodium distachyon BRADI3G40280 N