Ca_19877 (Cicer arietinum)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Ca_19877 T250082_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.883 0.712
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.883 0.712
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_19877 MADF 42 124

Links

Other MADF family TFs
Other Cicer arietinum TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000003636 Astyanax mexicanus ENSAMXG00000003636 N 0.000
ENSAMXG00000013350 Astyanax mexicanus ENSAMXG00000013350 N 0.000
ENSCING00000024278 Ciona intestinalis ENSCING00000024278 N 0.000
CAMTA1 Otolemur garnettii ENSOGAG00000009792 N 0.000
ENSPFOG00000004225 Poecilia formosa ENSPFOG00000004225 N 0.000
camta1a Takifugu rubripes ENSTRUG00000013622 N 0.000
ISCW018640 Ixodes scapularis ISCW018640 N 0.000