29872.m000548 (Ricinus communis)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 29872.m000548 T250445_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29872.m000548 MADF 183 254

Links

Other MADF family TFs
Other Ricinus communis TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.J02994 Eucalyptus grandis Eucgr.J02994 N 0.853
PK03816.1 Cannabis sativa PK03816.1 N 0.939
SapurV1A.3798s0010 Salix purpurea SapurV1A.3798s0010 N 0.841
SapurV1A.1168s0060 Salix purpurea SapurV1A.1168s0060 N 0.841
SapurV1A.0002s0250 Salix purpurea SapurV1A.0002s0250 N 0.838
orange1.1g048259m.g Citrus sinensis orange1.1g048259m.g N 0.929
MDP0000500940 Malus domestica MDP0000500940 N 0.876
MDP0000276691 Malus domestica MDP0000276691 N 0.904
Lus10035893.g Linum usitatissimum Lus10035893.g N 0.859
Lus10025772.g Linum usitatissimum Lus10025772.g N 0.873
Gorai.011G076900 Gossypium raimondii Gorai.011G076900 N 0.863
Gorai.010G228000 Gossypium raimondii Gorai.010G228000 N 0.937
Gorai.009G133300 Gossypium raimondii Gorai.009G133300 N 0.884
Gorai.006G098600 Gossypium raimondii Gorai.006G098600 N 0.883
gene05956-v1.0-hybrid Fragaria vesca gene05956-v1.0-hybrid N 0.924
evm.TU.supercontig_181.13 Carica papaya evm.TU.supercontig_181.13 N 0.941
GLYMA15G01730 Glycine max GLYMA15G01730 N 0.825
Ciclev10025757m.g Citrus clementina Ciclev10025757m.g N 0.929
mgf024433m Mimulus guttatus mgf024433m N 0.910
Cucsa.358990 Cucumis sativus Cucsa.358990 N 0.898
cassava1476.valid.m1 Manihot esculenta cassava1476.valid.m1 N 0.954
Pm027397 Prunus mume Pm027397 N 0.817
Pm013502 Prunus mume Pm013502 N 0.901
Cla015679 Citrullus lanatus Cla015679 N 0.898
Ca_12978 Cicer arietinum Ca_12978 N 0.831
VIT_09s0002g04700 Vitis vinifera VIT_09s0002g04700 N 0.834
TCM_028688 Theobroma cacao TCM_028688 N 0.921
PRUPE_ppa009556mg Prunus persica PRUPE_ppa009556mg N 0.901
POPTR_0003s05470 Populus trichocarpa POPTR_0003s05470 N 0.894
POPTR_0001s18000 Populus trichocarpa POPTR_0001s18000 N 0.836
PGSC0003DMG400031382 Solanum tuberosum PGSC0003DMG400031382 N 0.839
MTR_2g102227 Medicago truncatula MTR_2g102227 N 0.853