cassava30771.valid.m1 (Manihot esculenta)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 cassava30771.valid.m1 T250472_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.957 0.851
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.957 0.851
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.957 0.851
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.953 0.838
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava30771.valid.m1 MADF 161 242

Links

Other MADF family TFs
Other Manihot esculenta TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O3_05136 Capronia epimyces A1O3_05136 N
CADANGAG00000334 Aspergillus niger CADANGAG00000334 N
CFIO01_02134 Colletotrichum fioriniae CFIO01_02134 N
CGGC5_12603 Colletotrichum gloeosporioides CGGC5_12603 N
Cob_03757 Colletotrichum orbiculare Cob_03757 N
CSUB01_08179 Colletotrichum sublineola CSUB01_08179 N
EPUS_01257 Endocarpon pusillum EPUS_01257 N
GLRG_09516 Colletotrichum graminicola GLRG_09516 N
OIDMADRAFT_48054 Oidiodendron maius OIDMADRAFT_48054 N
PV04_01600 Capronia semiimmersa PV04_01600 N
PV07_04827 Cladophialophora immunda PV07_04827 N
Z517_04920 Fonsecaea pedrosoi Z517_04920 N