CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene17613-v1.0-hybrid
(
Fragaria vesca
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
gene17613-v1.0-hybrid
T250691_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna17613.1-v1.0-hybrid
MADF
34
115
LIQAYQEKWYELRRGQLKASQWEEVAVTVAARCGYDYTEQSKTATQCRHKMEKLRQRHRSVKKRLGRSFGSGWPYFDLMERL
Links
Other
MADF
family TFs
Other
Fragaria vesca
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_5g017500
Medicago truncatula
MTR_5g017500
N
0.910
POPTR_0002s24480
Populus trichocarpa
POPTR_0002s24480
N
0.838
30204.m001751
Ricinus communis
30204.m001751
N
0.848
cassava28795.m1
Manihot esculenta
cassava28795.m1
N
0.883
SapurV1A.0135s0330
Salix purpurea
SapurV1A.0135s0330
N
0.838
PK06605.1
Cannabis sativa
PK06605.1
N
0.932