SapurV1A.0439s0120 (Salix purpurea)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 SapurV1A.0439s0120 T250849_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.880 0.616
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.880 0.616
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.880 0.616
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.838 0.616
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0439s0120.1.p MADF 94 175
SapurV1A.0439s0120.2.p MADF 94 175

Links

Other MADF family TFs
Other Salix purpurea TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_23931 Aegilops tauschii F775_23931 N
GRMZM2G126194 Zea mays GRMZM2G126194 N
MLOC_48372 Hordeum vulgare MLOC_48372 N
Traes_2DL_BB8506245 Triticum aestivum Traes_2DL_BB8506245 N