CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI02134900
(
Haemonchus contortus
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
HCOI02134900
T252034_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
madf-5
M02276_2.00
Caenorhabditis elegans
NNDCCGGHNN
NNDCCGGHNN
PBM
Weirauch et al.(2014)
pTH9076
0.844
0.747
For this family, TFs with SR scores >
0.812
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI02134900.t1
MADF
65
147
LIAEVKKHPCLYNHSKRGSGDTMERMRIWDMIAAAVDSNCSGDFAKKRWLQLRDRYRKELKTAIKHNFVTPIRWCYFSHLSWL
Links
Other
MADF
family TFs
Other
Haemonchus contortus
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
V499_03762
Pseudogymnoascus pannorum
V499_03762
N