AGL77 (Arabidopsis thaliana)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 AT5G38740 T252921_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL78
M10932_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT5G65330_01 		0.766 0.766
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G38740.1 MADS box 19 65

Links

Other MADS box family TFs
Other Arabidopsis thaliana TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BCL6 Homo sapiens ENSG00000113916 D 0.000
BCL6 Callithrix jacchus ENSCJAG00000014375 I 0.000
ENSPANG00000017677 Papio anubis ENSPANG00000017677 I 0.000
ENSGMOG00000013899 Gadus morhua ENSGMOG00000013899 N 0.000
SNAPOd2T00000666001 Oikopleura dioica SNAPOd2T00000666001 N 0.000
bcl6b Takifugu rubripes ENSTRUG00000013220 N 0.000
bcl6b Tetraodon nigroviridis ENSTNIG00000002560 N 0.000
ENSPFOG00000009503 Poecilia formosa ENSPFOG00000009503 N 0.000
bcl6b Oryzias latipes ENSORLG00000006659 N 0.000
ENSONIG00000004819 Oreochromis niloticus ENSONIG00000004819 N 0.000
ENSLOCG00000013298 Lepisosteus oculatus ENSLOCG00000013298 N 0.000
ENSAMXG00000012978 Astyanax mexicanus ENSAMXG00000012978 N 0.000
bcl6b Gasterosteus aculeatus ENSGACG00000019349 N 0.000
bcl6ab Danio rerio ENSDARG00000069295 N 0.000
ENSCSAVG00000006275 Ciona savignyi ENSCSAVG00000006275 N 0.000
ENSCING00000007627 Ciona intestinalis ENSCING00000007627 N 0.000
ENSAMXG00000018736 Astyanax mexicanus ENSAMXG00000018736 N 0.000