CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA000297
(
Oryza indica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
BGIOSGA000297
T252964_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA000297-PA
MADS box
10
60
LIENEKKRKATFKNRRDGLKQKVSQFATLCGVEALLICVAPAVAGGEVTTW
Links
Other
MADS box
family TFs
Other
Oryza indica
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_02854
Verticillium albo atrum
VDBG_02854
N
CCM_08621
Cordyceps militaris
CCM_08621
N
F503_08695
Ophiostoma piceae uamh
F503_08695
N
HMPREF1624_04390
Sporothrix schenckii
HMPREF1624_04390
N
MYCFIDRAFT_96869
Pseudocercospora fijiensis
MYCFIDRAFT_96869
N
PV05_05794
Exophiala xenobiotica
PV05_05794
N
PV08_11121
Exophiala spinifera
PV08_11121
N
S40285_06880
Stachybotrys chlorohalonata
S40285_06880
N
S40288_06666
Stachybotrys chartarum
S40288_06666
N
SPBR_05720
Sporothrix brasiliensis
SPBR_05720
N
VDBG_02854
Verticillium alfalfae
VDBG_02854
N
VHEMI08185
Torrubiella hemipterigena
VHEMI08185
N