fgenesh2_kg.2__2089__AT1G77950.1 (Arabidopsis lyrata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 fgenesh2_kg.2__2089__AT1G77950.1 T254018_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL67
M10907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT1G77950_01 		0.979 0.979
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.2__2089__AT1G77950.1 MADS box 10 57

Links

Other MADS box family TFs
Other Arabidopsis lyrata TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PISMIDRAFT_670105 Pisolithus microcarpus PISMIDRAFT_670105 N 0.000
Moror_825 Moniliophthora roreri Moror_825 N 0.000
PaG_00960 Pseudozyma aphidis PaG_00960 N 0.000
PAN0_024c6129 Pseudozyma antarctica PAN0_024c6129 N 0.000
PAXRUDRAFT_821096 Paxillus rubicundulus PAXRUDRAFT_821096 N 0.000
PFL1_03819 Pseudozyma flocculosa PFL1_03819 N 0.000
PHACADRAFT_255607 Phanerochaete carnosa PHACADRAFT_255607 N 0.000
PHLGIDRAFT_82021 Phlebiopsis gigantea PHLGIDRAFT_82021 N 0.000
PHSY_007464 Pseudozyma hubeiensis PHSY_007464 N 0.000
PIIN_03157 Piriformospora indica PIIN_03157 N 0.000
PILCRDRAFT_823319 Piloderma croceum PILCRDRAFT_823319 N 0.000
M422DRAFT_71920 Sphaerobolus stellatus M422DRAFT_71920 N 0.000
PLEOSDRAFT_1110570 Pleurotus ostreatus PLEOSDRAFT_1110570 N 0.000
PSEUBRA_SCAF13g01932 Pseudozyma brasiliensis PSEUBRA_SCAF13g01932 N 0.000
SCHCODRAFT_74719 Schizophyllum commune SCHCODRAFT_74719 N 0.000
sr15132 Sporisorium reilianum sr15132 N 0.000
UHOR_06369 Ustilago hordei UHOR_06369 N 0.000
UM04242 Ustilago maydis UM04242 N 0.000
V565_017120 Rhizoctonia solani V565_017120 N 0.000
fgenesh1_pg.C_scaffold_1000144 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_1000144 N 0.000
e_gw1.15.51.1 Tremella mesenterica e_gw1.15.51.1 N 0.000
estExt_Genewise1.C_20637 Heterobasidion annosum estExt_Genewise1.C_20637 N 0.000
GYMLUDRAFT_75242 Gymnopus luxurians GYMLUDRAFT_75242 N 0.000
BN946_scf185014.g25 Trametes cinnabarina BN946_scf185014.g25 N 0.000
BOTBODRAFT_155106 Botryobasidium botryosum BOTBODRAFT_155106 N 0.000
CC1G_01048 Coprinopsis cinerea CC1G_01048 N 0.000
CERSUDRAFT_82708 Ceriporiopsis subvermispora CERSUDRAFT_82708 N 0.000
CY34DRAFT_800522 Suillus luteus CY34DRAFT_800522 N 0.000
DACRYDRAFT_20007 Dacryopinax sp DACRYDRAFT_20007 N 0.000
E5Q_03246 Mixia osmundae E5Q_03246 N 0.000
FOMPIDRAFT_1025229 Fomitopsis pinicola FOMPIDRAFT_1025229 N 0.000
GALMADRAFT_269832 Galerina marginata GALMADRAFT_269832 N 0.000
GLOTRDRAFT_136812 Gloeophyllum trabeum GLOTRDRAFT_136812 N 0.000
A1Q1_01006 Trichosporon asahii A1Q1_01006 N 0.000
HETIRDRAFT_432523 Heterobasidion irregulare HETIRDRAFT_432523 N 0.000
JAAARDRAFT_31927 Jaapia argillacea JAAARDRAFT_31927 N 0.000
K437DRAFT_69739 Tilletiaria anomala K437DRAFT_69739 N 0.000
LACBIDRAFT_305811 Laccaria bicolor LACBIDRAFT_305811 N 0.000
M378DRAFT_187599 Amanita muscaria M378DRAFT_187599 N 0.000
M404DRAFT_992985 Pisolithus tinctorius M404DRAFT_992985 N 0.000
M408DRAFT_197963 Serendipita vermifera M408DRAFT_197963 N 0.000
M413DRAFT_15049 Hebeloma cylindrosporum M413DRAFT_15049 N 0.000
M422DRAFT_180219 Sphaerobolus stellatus M422DRAFT_180219 N 0.000