GRMZM2G137387 (Zea mays)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GRMZM2G137387 T254301_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL42
M06995_2.00 		Arabidopsis thaliana
RATGATG
CATCATY		 Dap-seq
OMalley et al.(2016)
AGL42_col_a 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G137387_P01 MADS box 223 270

Links

Other MADS box family TFs
Other Zea mays TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGL42 Arabidopsis thaliana AT5G62165 D 0.708
SELMODRAFT_449594 Selaginella moellendorffii SELMODRAFT_449594 I 0.708
Ca_19854 Cicer arietinum Ca_19854 I 0.708
TT16 Vitis vinifera VIT_01s0011g01560 I 0.729
TRIUR3_26896 Triticum urartu TRIUR3_26896 I 0.708
TRIUR3_18402 Triticum urartu TRIUR3_18402 I 0.812
Traes_6DS_9BBDCC9F7 Triticum aestivum Traes_6DS_9BBDCC9F7 I 0.708
Traes_6BS_5789476CB Triticum aestivum Traes_6BS_5789476CB I 0.708
Traes_6AS_57E50EE92 Triticum aestivum Traes_6AS_57E50EE92 I 0.708
Traes_2DL_6CD5A5CD9 Triticum aestivum Traes_2DL_6CD5A5CD9 I 0.812
Traes_2AL_8DF89AA72 Triticum aestivum Traes_2AL_8DF89AA72 I 0.812
mgf025830m Mimulus guttatus mgf025830m I 0.708
SELMODRAFT_449545 Selaginella moellendorffii SELMODRAFT_449545 I 0.708
scaffold_801621.1 Arabidopsis lyrata scaffold_801621.1 I 0.708
Sb06g028420 Sorghum bicolor Sb06g028420 I 0.938
PRUPE_ppa019267mg Prunus persica PRUPE_ppa019267mg I 0.708
MADS31 Oryza sativa OS04G0614100 I 0.854
ORUFI04G26810 Oryza rufipogon ORUFI04G26810 I 0.854
ORGLA04G0222300 Oryza glaberrima ORGLA04G0222300 I 0.854
OPUNC04G22650 Oryza punctata OPUNC04G22650 I 0.854
Carubv10027142m.g Capsella rubella Carubv10027142m.g I 0.708
Thhalv10015303m.g Eutrema salsugineum Thhalv10015303m.g I 0.729
Thhalv10014716m.g Eutrema salsugineum Thhalv10014716m.g I 0.708
Thhalv10004954m.g Eutrema salsugineum Thhalv10004954m.g I 0.708
Pavir.J09556 Panicum virgatum Pavir.J09556 I 0.708
Pavir.Gb00526 Panicum virgatum Pavir.Gb00526 I 0.917
Pavir.Ga00461 Panicum virgatum Pavir.Ga00461 I 0.938
Pavir.Ea03607 Panicum virgatum Pavir.Ea03607 I 0.708
Pavir.Da00991 Panicum virgatum Pavir.Da00991 I 0.708
MDP0000268317 Malus domestica MDP0000268317 I 0.708
Pm019404 Prunus mume Pm019404 I 0.708
Carubv10027093m.g Capsella rubella Carubv10027093m.g I 0.729
Carubv10026982m.g Capsella rubella Carubv10026982m.g I 0.750
Cagra.4003s0006 Capsella grandiflora Cagra.4003s0006 I 0.708
Cagra.0277s0030 Capsella grandiflora Cagra.0277s0030 I 0.729
Bostr.26833s0022 Boechera stricta Bostr.26833s0022 I 0.729
Bostr.15774s0334 Boechera stricta Bostr.15774s0334 I 0.729
Aquca_022_00241 Aquilegia coerulea Aquca_022_00241 I 0.708
OMERI04G20840 Oryza meridionalis OMERI04G20840 I 0.854
Bo9g103660 Brassica oleracea Bo9g103660 I 0.708
GLYMA13G02170 Glycine max GLYMA13G02170 I 0.708
F775_30836 Aegilops tauschii F775_30836 I 0.708
F775_05654 Aegilops tauschii F775_05654 I 0.812
BRADI5G21700 Brachypodium distachyon BRADI5G21700 I 0.833
BRADI3G05260 Brachypodium distachyon BRADI3G05260 I 0.708
Bra029155 Brassica rapa Bra029155 I 0.708
Bra029154 Brassica rapa Bra029154 I 0.708
Bra028283 Brassica rapa Bra028283 I 0.708
Bra028282 Brassica rapa Bra028282 I 0.708
GLYMA14G34160 Glycine max GLYMA14G34160 I 0.708
Bo3g023570 Brassica oleracea Bo3g023570 I 0.708
BGIOSGA017110 Oryza indica BGIOSGA017110 I 0.854
BGIOSGA015023 Oryza indica BGIOSGA015023 I 0.700
AGL71 Arabidopsis thaliana AT5G51870 I 0.729
AGL72 Arabidopsis thaliana AT5G51860 I 0.708
AMTR_s00127p00060060 Amborella trichopoda AMTR_s00127p00060060 I 0.708
AMTR_s00002p00262770 Amborella trichopoda AMTR_s00002p00262770 I 0.729
AGL71 Arabidopsis lyrata Al_scaffold_0008_1558 I 0.729
GSMUA_Achr6G18670_001 Musa acuminata GSMUA_Achr6G18670_001 I 0.708
OLONG_023633 Oryza longistaminata OLONG_023633 I 0.711
OLONG_021245 Oryza longistaminata OLONG_021245 I 0.833
OGLUM04G25090 Oryza glumaepatula OGLUM04G25090 I 0.854
OBART04G25610 Oryza barthii OBART04G25610 I 0.854
OB04G32080 Oryza brachyantha OB04G32080 I 0.854
MLOC_65966 Hordeum vulgare MLOC_65966 I 0.708
MLOC_12133 Hordeum vulgare MLOC_12133 I 0.812
LPERR04G20730 Leersia perrieri LPERR04G20730 I 0.875
AC233912.1_FG001 Zea mays AC233912.1_FG001 I 0.958
GSMUA_Achr5G01230_001 Musa acuminata GSMUA_Achr5G01230_001 I 0.708
GSMUA_Achr3G23580_001 Musa acuminata GSMUA_Achr3G23580_001 I 0.750
GSMUA_Achr2G02660_001 Musa acuminata GSMUA_Achr2G02660_001 I 0.792
GRMZM2G135018 Zea mays GRMZM2G135018 I 0.938
GRMZM2G128953 Zea mays GRMZM2G128953 I 0.958
GRMZM2G005155 Zea mays GRMZM2G005155 I 0.938
GRMZM2G446426 Zea mays GRMZM2G446426 N 0.958
GRMZM2G148220 Zea mays GRMZM2G148220 N 0.896