CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OLONG_015766
(
Oryza longistaminata
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OLONG_015766
T255132_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_015766-R1
MADS box
276
323
GDKKVRDACFSKRHTTIFNKANELAILCGVMVAVVFVSPNANGGIFSF
Links
Other
MADS box
family TFs
Other
Oryza longistaminata
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA011095
Oryza indica
BGIOSGA011095
N
0.957
OB03G21040
Oryza brachyantha
OB03G21040
N
0.891
OBART03G10890
Oryza barthii
OBART03G10890
N
1.000
OMERI03G10160
Oryza meridionalis
OMERI03G10160
N
1.000
ONIVA03G11500
Oryza nivara
ONIVA03G11500
N
1.000
OPUNC03G10480
Oryza punctata
OPUNC03G10480
N
0.957
ORGLA03G0104600
Oryza glaberrima
ORGLA03G0104600
N
1.000
ORUFI03G11130
Oryza rufipogon
ORUFI03G11130
N
1.000