CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC01G11720
(
Oryza punctata
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OPUNC01G11720
T255286_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC01G11720.1
MADS box
10
54
RVAKDSTRRLTFKKRRRGLIKKAGELASLCGIGVCVVVYGEGEVN
Links
Other
MADS box
family TFs
Other
Oryza punctata
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA003303
Oryza indica
BGIOSGA003303
N
0.851
LPERR01G11040
Leersia perrieri
LPERR01G11040
N
0.844
OB01G21760
Oryza brachyantha
OB01G21760
N
0.848
OBART01G12040
Oryza barthii
OBART01G12040
N
0.851
OGLUM01G13480
Oryza glumaepatula
OGLUM01G13480
N
0.851
ONIVA01G14270
Oryza nivara
ONIVA01G14270
N
0.851
ORGLA01G0101600
Oryza glaberrima
ORGLA01G0101600
N
0.851
ORUFI01G13010
Oryza rufipogon
ORUFI01G13010
N
0.851