CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ORGLA03G0104600
(
Oryza glaberrima
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
ORGLA03G0104600
T255376_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA03G0104600.1
MADS box
16
65
KCGDKKVRDACFSKRHTTIFNKANELAILCGVMVAVVFVSPNANGGIFSF
Links
Other
MADS box
family TFs
Other
Oryza glaberrima
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA011095
Oryza indica
BGIOSGA011095
N
0.917
OB03G21040
Oryza brachyantha
OB03G21040
N
0.891
OBART03G10890
Oryza barthii
OBART03G10890
N
1.000
OLONG_015766
Oryza longistaminata
OLONG_015766
N
1.000
OMERI03G10160
Oryza meridionalis
OMERI03G10160
N
1.000
ONIVA03G11500
Oryza nivara
ONIVA03G11500
N
1.000
OPUNC03G10480
Oryza punctata
OPUNC03G10480
N
0.917
ORUFI03G11130
Oryza rufipogon
ORUFI03G11130
N
1.000