CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400043614
(
Solanum tuberosum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
PGSC0003DMG400043614
T255718_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400094043
MADS box
16
43
KIENEDARYTVFSKLRSTLYKKASELVG
Links
Other
MADS box
family TFs
Other
Solanum tuberosum
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA018332
Oryza indica
BGIOSGA018332
N
OBART05G10920
Oryza barthii
OBART05G10920
N
OGLUM05G11530
Oryza glumaepatula
OGLUM05G11530
N
OMERI05G09610
Oryza meridionalis
OMERI05G09610
N
OPUNC05G09320
Oryza punctata
OPUNC05G09320
N
ORGLA05G0094200
Oryza glaberrima
ORGLA05G0094200
N
ORUFI05G11790
Oryza rufipogon
ORUFI05G11790
N
OS05G0305700
Oryza sativa
OS05G0305700
N
Si023090m.g
Setaria italica
Si023090m.g
N
Cucsa.095530
Cucumis sativus
Cucsa.095530
N