PV07_11277 (Cladophialophora immunda)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 PV07_11277 T255991_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.729 0.729
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.729 0.729
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.729 0.729
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIW23045 MADS box 10 57

Links

Other MADS box family TFs
Other Cladophialophora immunda TFs

240 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
jazf1b Takifugu rubripes ENSTRUG00000015434 N
ENSPFOG00000002162 Poecilia formosa ENSPFOG00000002162 N
ENSPFOG00000004320 Poecilia formosa ENSPFOG00000004320 N
ENSPPYG00000017691 Pongo abelii ENSPPYG00000017691 N
JAZF1 Pan troglodytes ENSPTRG00000019027 N
Jazf1 Rattus norvegicus ENSRNOG00000027026 N
JAZF1 Sus scrofa ENSSSCG00000016691 N
ENSSTOG00000005946 Ictidomys tridecemlineatus ENSSTOG00000005946 N
JAZF1 Taeniopygia guttata ENSTGUG00000002953 N
jazf1a Tetraodon nigroviridis ENSTNIG00000009204 N
jazf1b Tetraodon nigroviridis ENSTNIG00000018430 N
ENSPCAG00000012434 Procavia capensis ENSPCAG00000012434 N
jazf1a Takifugu rubripes ENSTRUG00000018220 N
ENSTSYG00000007474 Tarsius syrichta ENSTSYG00000007474 N
JAZF1 Tursiops truncatus ENSTTRG00000015292 N
ENSXMAG00000013895 Xiphophorus maculatus ENSXMAG00000013895 N
Brh_R011697 Buceros rhinoceros Brh_R011697 N
Cmyd_10020957 Chelonia mydas Cmyd_10020957 N
Myotis_brandtii_JAZF1_10034022 Myotis brandtii Myotis_brandtii_JAZF1_10034022 N
Tal_R005424 Tyto alba Tal_R005424 N
jazf1 Xenopus tropicalis XB-GENE-950886 N
ENSGALG00000011126 Gallus gallus ENSGALG00000011126 N
ENSAPLG00000014482 Anas platyrhynchos ENSAPLG00000014482 N
ENSBTAG00000019024 Bos taurus ENSBTAG00000019024 N
JAZF1 Callithrix jacchus ENSCJAG00000008331 N
ENSCSAG00000014355 Chlorocebus sabaeus ENSCSAG00000014355 N
jazf1b Danio rerio ENSDARG00000056793 N
jazf1a Danio rerio ENSDARG00000102551 N
ENSETEG00000002956 Echinops telfairi ENSETEG00000002956 N
ENSFCAG00000023035 Felis catus ENSFCAG00000023035 N
JAZF1 Homo sapiens ENSG00000153814 N
jazf1b Gasterosteus aculeatus ENSGACG00000008216 N
ENSAMXG00000000627 Astyanax mexicanus ENSAMXG00000000627 N
JAZF1 Gorilla gorilla ENSGGOG00000011408 N
ENSLACG00000009439 Latimeria chalumnae ENSLACG00000009439 N
ENSLOCG00000011888 Lepisosteus oculatus ENSLOCG00000011888 N
ENSMGAG00000010727 Meleagris gallopavo ENSMGAG00000010727 N
ENSMLUG00000013130 Myotis lucifugus ENSMLUG00000013130 N
Jazf1 Mus musculus ENSMUSG00000063568 N
JAZF1 Otolemur garnettii ENSOGAG00000029759 N
ENSONIG00000002950 Oreochromis niloticus ENSONIG00000002950 N
ENSONIG00000004607 Oreochromis niloticus ENSONIG00000004607 N