scaffold_704060.1 (Arabidopsis lyrata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 scaffold_704060.1 T256127_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL78
M10932_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT5G65330_01 		0.761 0.761
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_704060.1 MADS box 21 66

Links

Other MADS box family TFs
Other Arabidopsis lyrata TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA034988 Oryza indica BGIOSGA034988 N
OGLUM11G05850 Oryza glumaepatula OGLUM11G05850 N
ONIVA11G06150 Oryza nivara ONIVA11G06150 N
ORGLA11G0055800 Oryza glaberrima ORGLA11G0055800 N
OS11G0206600 Oryza sativa OS11G0206600 N