CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_03707
(
Verticillium alfalfae
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
VDBG_03707
T256753_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEY17598
MADS box
404
431
TKPHELSVLCSVDVAVFILGNNKKLYEY
Links
Other
MADS box
family TFs
Other
Verticillium alfalfae
TFs
150 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NV16594
Nasonia vitripennis
NV16594
I
CpipJ_CPIJ006378
Culex pipiens
CpipJ_CPIJ006378
N
AAEL002343
Aedes aegypti
AAEL002343
N
AAEL014740
Aedes aegypti
AAEL014740
N
ACEP14936
Atta cephalotes
ACEP14936
N
ACYPI001635
Acyrthosiphon pisum
ACYPI001635
N
ADAC003908
Anopheles darlingi
ADAC003908
N
AGAP000056
Anopheles gambiae
AGAP000056
N
CGI_10014877
Crassostrea gigas
CGI_10014877
N
CPIJ006378
Culex quinquefasciatus
CPIJ006378
N
DAPPUDRAFT_59022
Daphnia pulex
DAPPUDRAFT_59022
N
ENSAMEG00000018716
Ailuropoda melanoleuca
ENSAMEG00000018716
N
ENSAPLG00000000714
Anas platyrhynchos
ENSAPLG00000000714
N
NPAS1
Bos taurus
ENSBTAG00000015576
N
NPAS1
Canis familiaris
ENSCAFG00000032405
N
NPAS3
Choloepus hoffmanni
ENSCHOG00000013756
N
NPAS3
Callithrix jacchus
ENSCJAG00000005437
N
NPAS1
Callithrix jacchus
ENSCJAG00000011666
N
NPAS3
Cavia porcellus
ENSCPOG00000006976
N
NPAS1
Cavia porcellus
ENSCPOG00000023069
N
ENSCSAG00000003006
Chlorocebus sabaeus
ENSCSAG00000003006
N
NPAS1
Dasypus novemcinctus
ENSDNOG00000035321
N
Npas3
Dipodomys ordii
ENSDORG00000000860
N
ENSECAG00000004630
Equus caballus
ENSECAG00000004630
N
NPAS3
Erinaceus europaeus
ENSEEUG00000006528
N
NPAS3
Echinops telfairi
ENSETEG00000016603
N
NPAS1
Felis catus
ENSFCAG00000004833
N
NPAS1
Homo sapiens
ENSG00000130751
N
NPAS3
Homo sapiens
ENSG00000151322
N
NPAS3
Gallus gallus
ENSGALG00000029022
N
NPAS1
Gorilla gorilla
ENSGGOG00000013398
N
NPAS3
Gorilla gorilla
ENSGGOG00000022941
N
ENSLACG00000001145
Latimeria chalumnae
ENSLACG00000001145
N
NPAS3
Loxodonta africana
ENSLAFG00000007169
N
ENSMEUG00000000606
Macropus eugenii
ENSMEUG00000000606
N
ENSMEUG00000012966
Macropus eugenii
ENSMEUG00000012966
N
ENSMGAG00000016559
Meleagris gallopavo
ENSMGAG00000016559
N
NPAS1
Microcebus murinus
ENSMICG00000006346
N
NPAS1
Macaca mulatta
ENSMMUG00000011330
N
NPAS3
Macaca mulatta
ENSMMUG00000014839
N
NPAS1
Monodelphis domestica
ENSMODG00000009053
N
ENSMODG00000024103
Monodelphis domestica
ENSMODG00000024103
N
ENSMPUG00000001046
Mustela putorius furo
ENSMPUG00000001046
N
ENSMPUG00000005118
Mustela putorius furo
ENSMPUG00000005118
N
Npas1
Mus musculus
ENSMUSG00000001988
N
Npas3
Mus musculus
ENSMUSG00000021010
N
ENSNLEG00000002946
Nomascus leucogenys
ENSNLEG00000002946
N
ENSNLEG00000003239
Nomascus leucogenys
ENSNLEG00000003239
N
ENSOANG00000014043
Ornithorhynchus anatinus
ENSOANG00000014043
N
ENSOARG00000010869
Ovis aries
ENSOARG00000010869
N
NPAS1
Otolemur garnettii
ENSOGAG00000012829
N
NPAS3
Otolemur garnettii
ENSOGAG00000014886
N
NPAS3
Ochotona princeps
ENSOPRG00000008184
N
NPAS1
Ochotona princeps
ENSOPRG00000014860
N
ENSPANG00000014704
Papio anubis
ENSPANG00000014704
N
ENSPCAG00000000784
Procavia capensis
ENSPCAG00000000784
N
NPAS3
Procavia capensis
ENSPCAG00000007391
N
ENSPPYG00000010165
Pongo abelii
ENSPPYG00000010165
N
ENSPSIG00000017052
Pelodiscus sinensis
ENSPSIG00000017052
N
NPAS3
Pan troglodytes
ENSPTRG00000006249
N
NPAS1
Pan troglodytes
ENSPTRG00000011199
N
Npas1
Rattus norvegicus
ENSRNOG00000015376
N
NPAS3
Sorex araneus
ENSSARG00000003164
N
ENSSARG00000014127
Sorex araneus
ENSSARG00000014127
N
ENSSHAG00000011475
Sarcophilus harrisii
ENSSHAG00000011475
N
NPAS1
Sus scrofa
ENSSSCG00000003108
N
ENSSSCG00000024473
Sus scrofa
ENSSSCG00000024473
N
ENSSTOG00000003396
Ictidomys tridecemlineatus
ENSSTOG00000003396
N
ENSSTOG00000014736
Ictidomys tridecemlineatus
ENSSTOG00000014736
N
NPAS3
Tupaia belangeri
ENSTBEG00000016041
N
ENSTGUG00000011911
Taeniopygia guttata
ENSTGUG00000011911
N
NPAS3
Tursiops truncatus
ENSTTRG00000003266
N
NPAS1
Tursiops truncatus
ENSTTRG00000011416
N
NPAS3
Vicugna pacos
ENSVPAG00000001108
N
GA19928
Drosophila pseudoobscura
FBgn0079924
N
GF24890
Drosophila ananassae
FBgn0101882
N
GG14662
Drosophila erecta
FBgn0106918
N
GH15456
Drosophila grimshawi
FBgn0122928
N
GH23748
Drosophila grimshawi
FBgn0131205
N
GI16736
Drosophila mojavensis
FBgn0139484
N
GD25707
Drosophila simulans
FBgn0196992
N
GJ12482
Drosophila virilis
FBgn0199724
N
GK20151
Drosophila willistoni
FBgn0222148
N
GE21022
Drosophila yakuba
FBgn0238304
N
trh
Drosophila melanogaster
FBgn0262139
N
GB52114
Apis mellifera
GB52114
N
HelroG63031
Helobdella robusta
HelroG63031
N
ISCW018625
Ixodes scapularis
ISCW018625
N
L798_01241
Zootermopsis nevadensis
L798_01241
N
LotgiG127403
Lottia gigantea
LotgiG127403
N
MCINX015160
Melitaea cinxia
MCINX015160
N
NEMVEDRAFT_v1g96877
Nematostella vectensis
NEMVEDRAFT_v1g96877
N
NV13641
Nasonia vitripennis
NV13641
N
PHUM613040
Pediculus humanus
PHUM613040
N
SMAR015279
Strigamia maritima
SMAR015279
N
SPU_014249
Strongylocentrotus purpuratus
SPU_014249
N
TC001448
Tribolium castaneum
TC001448
N
tetur01g16040
Tetranychus urticae
tetur01g16040
N
Aan_R007988
Calypte anna
Aan_R007988
N
Afo_R000495
Aptenodytes forsteri
Afo_R000495
N
Brh_R013374
Buceros rhinoceros
Brh_R013374
N
Cflo_02462--XP_391937.2_APIME
Camponotus floridanus
Cflo_02462--XP_391937.2_APIME
N
ENSP00000348460-D1
Bos grunniens
ENSP00000348460-D1
N
ENSP00000348460
Macaca fascicularis
ENSP00000348460
N
ENSP00000405290
Macaca fascicularis
ENSP00000405290
N
Gfo_R012966
Geospiza fortis
Gfo_R012966
N
Hsal_10736--XP_391937.2_APIME
Harpegnathos saltator
Hsal_10736--XP_391937.2_APIME
N
Pvit_04747
Pogona vitticeps
Pvit_04747
N
Tal_R006980
Tyto alba
Tal_R006980
N
gw.84.113.1
Branchiostoma floridae
gw.84.113.1
N
Ocbimv22029779m.g
Octopus bimaculoides
Ocbimv22029779m.g
N
Sakowv30006415m.g
Saccoglossus kowalevskii
Sakowv30006415m.g
N
CLEC007310
Cimex lectularius
CLEC007310
N
LCUP010821
Lucilia cuprina
LCUP010821
N
LDEC011477
Leptinotarsa decemlineata
LDEC011477
N
npas3
Xenopus tropicalis
XB-GENE-999791
N
AALB007750
Anopheles albimanus
AALB007750
N
AARA001122
Anopheles arabiensis
AARA001122
N
AATE003730
Anopheles atroparvus
AATE003730
N
ACOM029080
Anopheles coluzzii
ACOM029080
N
ACUA021406
Anopheles culicifacies
ACUA021406
N
ADIR001051
Anopheles dirus
ADIR001051
N
AEPI007278
Anopheles epiroticus
AEPI007278
N
AFAF017713
Anopheles farauti
AFAF017713
N
AFUN004699
Anopheles funestus
AFUN004699
N
AMAM000698
Anopheles maculatus
AMAM000698
N
AMEC022213
Anopheles melas
AMEC022213
N
AMEM001368
Anopheles merus
AMEM001368
N
AMIN002121
Anopheles minimus
AMIN002121
N
AQUA005712
Anopheles quadriannulatus
AQUA005712
N
ASIS013948
Anopheles sinensis
ASIS013948
N
ASTEI06194
Anopheles stephensi
ASTEI06194
N
BGLB001139
Biomphalaria glabrata
BGLB001139
N
MDOA009035
Musca domestica
MDOA009035
N