Cucsa.349650 (Cucumis sativus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Cucsa.349650 T257298_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q8VWZ2_MALDO
M11024_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS15_02 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.349650.1 MADS box 28 75

Links

Other MADS box family TFs
Other Cucumis sativus TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NECAME_16117 Necator americanus NECAME_16117 N 0.000
HCOI00022200 Haemonchus contortus HCOI00022200 N 0.000
HCOI00569400 Haemonchus contortus HCOI00569400 N 0.000
HPBE_0000083501 Heligmosomoides bakeri HPBE_0000083501 N 0.000
HPLM_0001658301 Haemonchus placei HPLM_0001658301 N 0.000
L596_g22461 Steinernema carpocapsae L596_g22461 N 0.000
L889_g3706 Steinernema feltiae L889_g3706 N 0.000
L892_g30100 Steinernema scapterisci L892_g30100 N 0.000
L898_g375 Steinernema monticolum L898_g375 N 0.000
nAv.1.0.1.g03900 Acanthocheilonema viteae nAv.1.0.1.g03900 N 0.000
nDi.2.2.2.g02092 Dirofilaria immitis nDi.2.2.2.g02092 N 0.000
Hba_20635 Heterorhabditis bacteriophora Hba_20635 N 0.000
nLs.2.1.2.g01047 Litomosoides sigmodontis nLs.2.1.2.g01047 N 0.000
nOo.2.0.1.g01360 Onchocerca ochengi nOo.2.0.1.g01360 N 0.000
OESDEN_12607 Oesophagostomum dentatum OESDEN_12607 N 0.000
OESDEN_21929 Oesophagostomum dentatum OESDEN_21929 N 0.000
OFLC_0001285101 Onchocerca flexuosa OFLC_0001285101 N 0.000
scaffold237-EXSNAP2012.36 Pristionchus exspectatus scaffold237-EXSNAP2012.36 N 0.000
SMUV_0000644601 Syphacia muris SMUV_0000644601 N 0.000
SVUK_0000819801 Strongylus vulgaris SVUK_0000819801 N 0.000
TCLT_0000145301 Thelazia callipaeda TCLT_0000145301 N 0.000
TELCIR_14354 Teladorsagia circumcincta TELCIR_14354 N 0.000
ALUE_0000987201 Ascaris lumbricoides ALUE_0000987201 N 0.000
Bm7076 Brugia malayi Bm7076 N 0.000
CBG09815 Caenorhabditis briggsae CBG09815 N 0.000
CBN09141 Caenorhabditis brenneri CBN09141 N 0.000
CJA31291 Caenorhabditis japonica CJA31291 N 0.000
CRE25200 Caenorhabditis remanei CRE25200 N 0.000
LOAG_01279 Loa loa LOAG_01279 N 0.000
PPA02543 Pristionchus pacificus PPA02543 N 0.000
swsn-3 Caenorhabditis elegans WBGene00022182 N 0.000
WBGene00245293 Onchocerca volvulus WBGene00245293 N 0.000
ACAC_0000207501 Angiostrongylus cantonensis ACAC_0000207501 N 0.000
WUBG_07283 Wuchereria bancrofti WUBG_07283 N 0.000
ANCCAN_03785 Ancylostoma caninum ANCCAN_03785 N 0.000
ANCCAN_09575 Ancylostoma caninum ANCCAN_09575 N 0.000
ANCCEY_02937 Ancylostoma ceylanicum ANCCEY_02937 N 0.000
ANCDUO_12071 Ancylostoma duodenale ANCDUO_12071 N 0.000
ASIM_0001578601 Anisakis simplex ASIM_0001578601 N 0.000
ASIM_0001639001 Anisakis simplex ASIM_0001639001 N 0.000
ASU_02248 Ascaris suum ASU_02248 N 0.000
DME_0000063901 Dracunculus medinensis DME_0000063901 N 0.000
EEL_0000522201 Elaeophora elaphi EEL_0000522201 N 0.000
EVEC_0000378901 Enterobius vermicularis EVEC_0000378901 N 0.000