e_gw1.9.299.1 (Sporobolomyces roseus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 e_gw1.9.299.1 T257318_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MCM1
M01558_2.00 		Saccharomyces cerevisiae
YNNWWNNRGN
NCYNNWWNNR		 PBM
Zhu et al.(2009)
Mcm1 		0.750 0.750
MCM1
M08589_2.00 		Saccharomyces cerevisiae
HNHTWCCBDWWHVGGAHDHN
NDHDTCCBDWWHVGGWADND		 Misc
DeBoer et al.(2011)
YMR043W_831 		0.750 0.750
MCM1
M10990_2.00 		Saccharomyces cerevisiae
WNDCCYAAWNNGGWMW
WKWCCNNWTTRGGHNW		 Transfac
Matys et al.(2006)
F$MCM1_01 		0.750 0.750
MCM1
M10991_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MCM1_02 		0.750 0.750
MCM1
M10992_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MCM1_Q6 		0.750 0.750
MCM1
M08458_2.00 		Saccharomyces cerevisiae
TTCCYRAWNNGG
CCNNWTYRGGAA		 COMPILED
Mathelier et al.(2014)
MA0331.1 		0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.9.299.1 MADS box 29 76

Links

Other MADS box family TFs
Other Sporobolomyces roseus TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCU06907 Neurospora crassa NCU06907 D
PV04_04915 Capronia semiimmersa PV04_04915 I
Z519_10261 Cladophialophora bantiana Z519_10261 I
Z518_09813 Rhinocladiella mackenziei Z518_09813 I
Z517_12080 Fonsecaea pedrosoi Z517_12080 I
HMPREF1120_06603 Exophiala dermatitidis HMPREF1120_06603 I
HMPREF1541_09309 Cyphellophora europaea HMPREF1541_09309 I
MBM_04034 Marssonina brunnea MBM_04034 I
V499_09093 Pseudogymnoascus pannorum V499_09093 I
MYCTH_2308260 Myceliophthora thermophila MYCTH_2308260 I
NEUTE1DRAFT_130988 Neurospora tetrasperma NEUTE1DRAFT_130988 I
OIDMADRAFT_103771 Oidiodendron maius OIDMADRAFT_103771 I
PODANS_5_11890 Podospora anserina PODANS_5_11890 I
GSTUM_00007462001 Tuber melanosporum GSTUM_00007462001 I
PV05_09372 Exophiala xenobiotica PV05_09372 I
PV06_04279 Exophiala oligosperma PV06_04279 I
PV07_07651 Cladophialophora immunda PV07_07651 I
PV08_10349 Exophiala spinifera PV08_10349 I
PV10_00143 Exophiala mesophila PV10_00143 I
PV11_04194 Exophiala sideris PV11_04194 I
PVAR5_7714 Byssochlamys spectabilis PVAR5_7714 I
SBOR_8019 Sclerotinia borealis SBOR_8019 I
SMAC_05878 Sordaria macrospora SMAC_05878 I
THITE_2117700 Thielavia terrestris THITE_2117700 I
ATEG_04658 Aspergillus terreus CADATEAG00009335 I
A1O5_03439 Cladophialophora psammophila A1O5_03439 I
A1O7_04367 Cladophialophora yegresii A1O7_04367 I
A1O9_00612 Exophiala aquamarina A1O9_00612 I
e_gw1.00866.172.1 Aspergillus carbonarius e_gw1.00866.172.1 I
Bcin02g07540 Botrytis cinerea Bcin02g07540 I
CADAFLAG00002515 Aspergillus flavus CADAFLAG00002515 I
AFUA_3G11250 Aspergillus fumigatus CADAFUAG00005698 I
CADANGAG00002216 Aspergillus niger CADANGAG00002216 I
ANIA_04873 Aspergillus nidulans CADANIAG00005532 I
CADAORAG00001279 Aspergillus oryzae CADAORAG00001279 I
GMDG_06980 Pseudogymnoascus destructans GMDG_06980 I
NFIA_066040 Neosartorya fischeri CADNFIAG00006379 I
estExt_fgenesh2_pg.C_80281 Neurospora discreta estExt_fgenesh2_pg.C_80281 I
A1O1_03114 Capronia coronata A1O1_03114 I
CPUR_04347 Claviceps purpurea CPUR_04347 I
CTHT_0018750 Chaetomium thermophilum CTHT_0018750 I
EPUS_07921 Endocarpon pusillum EPUS_07921 I
EURHEDRAFT_515807 Aspergillus ruber EURHEDRAFT_515807 I
EV44_g6127 Erysiphe necator EV44_g6127 I
F503_03781 Ophiostoma piceae uamh F503_03781 I
G647_04328 Cladophialophora carrionii G647_04328 I
TRV_03376 Trichophyton verrucosum TRV_03376 N
CIMG_03820 Coccidioides immitis CIMG_03820 N
TSTA_031880 Talaromyces stipitatus TSTA_031880 N
PMAA_023500 Penicillium marneffei PMAA_023500 N
TESG_05703 Trichophyton tonsurans TESG_05703 N
TEQG_05544 Trichophyton equinum TEQG_05544 N
PMAA_023500 Talaromyces marneffei PMAA_023500 N
MGYG_01294 Microsporum gypseum MGYG_01294 N
MCYG_00678 Arthroderma otae MCYG_00678 N
H105_07634 Trichophyton soudanense H105_07634 N
H102_07608 Trichophyton rubrum H102_07608 N
H101_04757 Trichophyton interdigitale H101_04757 N
CPC735_005020 Coccidioides posadasii CPC735_005020 N
ACLA_039140 Aspergillus clavatus CADACLAG00003633 N
ARB_05394 Arthroderma benhamiae ARB_05394 N
MCYG_00678 Microsporum canis MCYG_00678 N