fgenesh1_pg.scaffold_198000079 (Physcomitrella patens)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 fgenesh1_pg.scaffold_198000079 T257351_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.scaffold_198000079 MADS box 15 53

Links

Other MADS box family TFs
Other Physcomitrella patens TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CUX1 Canis familiaris ENSCAFG00000013749 D
CUX2 Homo sapiens ENSG00000111249 D
CUX1 Homo sapiens ENSG00000257923 D
Cux1 Mus musculus ENSMUSG00000029705 D
Cux2 Mus musculus ENSMUSG00000042589 D
CUX2 Anolis carolinensis ENSACAG00000002281 I
CUX1 Anolis carolinensis ENSACAG00000015088 I
ENSAMEG00000013799 Ailuropoda melanoleuca ENSAMEG00000013799 I
ENSAMEG00000015392 Ailuropoda melanoleuca ENSAMEG00000015392 I
ENSAMXG00000006105 Astyanax mexicanus ENSAMXG00000006105 I
ENSAMXG00000008817 Astyanax mexicanus ENSAMXG00000008817 I
ENSAPLG00000002588 Anas platyrhynchos ENSAPLG00000002588 I
ENSAPLG00000004382 Anas platyrhynchos ENSAPLG00000004382 I
CUX2 Bos taurus ENSBTAG00000008571 I
CUX1 Bos taurus ENSBTAG00000010659 I
CUX2 Callithrix jacchus ENSCJAG00000011694 I
CUX1 Callithrix jacchus ENSCJAG00000016076 I
CUX2 Cavia porcellus ENSCPOG00000020483 I
ENSCSAG00000018062 Chlorocebus sabaeus ENSCSAG00000018062 I
cux1a Danio rerio ENSDARG00000078459 I
cux2b Danio rerio ENSDARG00000086345 I
CUX2 Dasypus novemcinctus ENSDNOG00000039959 I
CUX1 Erinaceus europaeus ENSEEUG00000005128 I
ENSFALG00000009019 Ficedula albicollis ENSFALG00000009019 I
ENSFALG00000009409 Ficedula albicollis ENSFALG00000009409 I
CUX2 Felis catus ENSFCAG00000003176 I
CUX1 Felis catus ENSFCAG00000008074 I
cux2b Gasterosteus aculeatus ENSGACG00000013522 I
ENSGALG00000001807 Gallus gallus ENSGALG00000001807 I
CUX2 Gallus gallus ENSGALG00000004598 I
CUX2 Gorilla gorilla ENSGGOG00000012173 I
ENSGMOG00000008990 Gadus morhua ENSGMOG00000008990 I
ENSGMOG00000017485 Gadus morhua ENSGMOG00000017485 I
ENSLACG00000014413 Latimeria chalumnae ENSLACG00000014413 I
ENSLACG00000017710 Latimeria chalumnae ENSLACG00000017710 I
CUX2 Loxodonta africana ENSLAFG00000001145 I
CUX1 Loxodonta africana ENSLAFG00000002555 I
ENSLOCG00000001531 Lepisosteus oculatus ENSLOCG00000001531 I
ENSLOCG00000007417 Lepisosteus oculatus ENSLOCG00000007417 I
ENSMEUG00000004239 Macropus eugenii ENSMEUG00000004239 I
ENSMEUG00000013552 Macropus eugenii ENSMEUG00000013552 I
CUX1 Meleagris gallopavo ENSMGAG00000003398 I
CUX2 Meleagris gallopavo ENSMGAG00000005225 I
CUX1 Microcebus murinus ENSMICG00000010274 I
CUX2 Myotis lucifugus ENSMLUG00000003239 I
CUX1 Myotis lucifugus ENSMLUG00000007264 I
CUX1 Macaca mulatta ENSMMUG00000021461 I
CUX2 Monodelphis domestica ENSMODG00000012254 I
CUX1 Monodelphis domestica ENSMODG00000013581 I
ENSMPUG00000002207 Mustela putorius furo ENSMPUG00000002207 I
ENSNLEG00000000470 Nomascus leucogenys ENSNLEG00000000470 I
ENSNLEG00000008310 Nomascus leucogenys ENSNLEG00000008310 I
CUX2 Ornithorhynchus anatinus ENSOANG00000004793 I
ENSOARG00000014629 Ovis aries ENSOARG00000014629 I
ENSOARG00000017879 Ovis aries ENSOARG00000017879 I
CUX2 Oryctolagus cuniculus ENSOCUG00000021923 I
ENSOGAG00000009038 Otolemur garnettii ENSOGAG00000009038 I
CUX2 Otolemur garnettii ENSOGAG00000029919 I
ENSONIG00000003797 Oreochromis niloticus ENSONIG00000003797 I
ENSONIG00000015972 Oreochromis niloticus ENSONIG00000015972 I
CUX1 Ochotona princeps ENSOPRG00000000165 I
CUX2 Ochotona princeps ENSOPRG00000006461 I
cux2b Oryzias latipes ENSORLG00000015973 I
ENSPANG00000011477 Papio anubis ENSPANG00000011477 I
ENSPANG00000016879 Papio anubis ENSPANG00000016879 I
ENSPFOG00000005210 Poecilia formosa ENSPFOG00000005210 I
ENSPSIG00000003536 Pelodiscus sinensis ENSPSIG00000003536 I
ENSPSIG00000008210 Pelodiscus sinensis ENSPSIG00000008210 I
CUX2 Pan troglodytes ENSPTRG00000005455 I
CUX1 Pan troglodytes ENSPTRG00000019531 I
CUX2 Pteropus vampyrus ENSPVAG00000013176 I
CUX1 Pteropus vampyrus ENSPVAG00000017756 I
Cux2 Rattus norvegicus ENSRNOG00000001259 I
Cux1 Rattus norvegicus ENSRNOG00000001424 I
ENSSHAG00000007801 Sarcophilus harrisii ENSSHAG00000007801 I
ENSSHAG00000009458 Sarcophilus harrisii ENSSHAG00000009458 I
CUX2 Sus scrofa ENSSSCG00000009831 I
ENSSTOG00000002242 Ictidomys tridecemlineatus ENSSTOG00000002242 I
ENSSTOG00000010390 Ictidomys tridecemlineatus ENSSTOG00000010390 I
CUX1 Taeniopygia guttata ENSTGUG00000004386 I
CUX2 Taeniopygia guttata ENSTGUG00000006470 I
ENSTNIG00000007722 Tetraodon nigroviridis ENSTNIG00000007722 I
cux2b Tetraodon nigroviridis ENSTNIG00000011453 I
CUX1 Takifugu rubripes ENSTRUG00000008546 I
cux2b Takifugu rubripes ENSTRUG00000015853 I
CUX2 Tursiops truncatus ENSTTRG00000000945 I
CUX1 Tursiops truncatus ENSTTRG00000014625 I
ENSXMAG00000004131 Xiphophorus maculatus ENSXMAG00000004131 I
ENSXMAG00000018520 Xiphophorus maculatus ENSXMAG00000018520 I
Aan_R003487 Calypte anna Aan_R003487 I
Aan_R010335 Calypte anna Aan_R010335 I
Afo_R009437 Aptenodytes forsteri Afo_R009437 I
Alligator_sinensis_CCG004936.1 Alligator sinensis Alligator_sinensis_CCG004936.1 I
Alligator_sinensis_CCG016555.1 Alligator sinensis Alligator_sinensis_CCG016555.1 I
Cmyd_10006308 Chelonia mydas Cmyd_10006308 I
Cmyd_10015658 Chelonia mydas Cmyd_10015658 I
ENSP00000261726-D1 Bos grunniens ENSP00000261726-D1 I
ENSP00000261726 Macaca fascicularis ENSP00000261726 I
ENSP00000353401-D1 Bos grunniens ENSP00000353401-D1 I
ENSP00000353401 Macaca fascicularis ENSP00000353401 I
Gfo_R003142 Geospiza fortis Gfo_R003142 I
Gfo_R011360 Geospiza fortis Gfo_R011360 I
Myotis_brandtii_CUX1_10015212 Myotis brandtii Myotis_brandtii_CUX1_10015212 I
Myotis_brandtii_CUX2_10011523 Myotis brandtii Myotis_brandtii_CUX2_10011523 I
Ogr05066 Ophisaurus gracilis Ogr05066 I
Ogr05872 Ophisaurus gracilis Ogr05872 I
Pvit_01819 Pogona vitticeps Pvit_01819 I
Pvit_05599 Pogona vitticeps Pvit_05599 I
Tal_R013483 Tyto alba Tal_R013483 I
cux2 Xenopus tropicalis XB-GENE-487236 I
XP_002942311 Xenopus tropicalis XP_002942311 I