CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bostr.18351s0040
(
Boechera stricta
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Bostr.18351s0040
T257588_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.18351s0040.1.p
MADS box
11
53
VENEKSRAKKLKKIRVGLMKKVKELTILCDVKACMIMFSPNEV
Links
Other
MADS box
family TFs
Other
Boechera stricta
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo5g135120
Brassica oleracea
Bo5g135120
N
0.727
Bostr.18351s0039
Boechera stricta
Bostr.18351s0039
N
0.705
Bostr.19424s0082
Boechera stricta
Bostr.19424s0082
N
0.744
Bostr.2199s0049
Boechera stricta
Bostr.2199s0049
N
0.907
Cagra.4044s0006
Capsella grandiflora
Cagra.4044s0006
N
0.721
Carubv10024813m.g
Capsella rubella
Carubv10024813m.g
N
0.721
Thhalv10022157m.g
Eutrema salsugineum
Thhalv10022157m.g
N
0.791