CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.29827s0112
(
Boechera stricta
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Bostr.29827s0112
T257628_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.29827s0112.1.p
MADS box
24
74
SSLSSAARKVTNSLSMREQTMFKKADELSILCDIEVCVIYYSRDGELIKTW
Links
Other
MADS box
family TFs
Other
Boechera stricta
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA15G06803
Glycine max
GLYMA15G06803
I
0.000
GLYMA15G06860
Glycine max
GLYMA15G06860
I
0.000
GSMUA_Achr8G33180_001
Musa acuminata
GSMUA_Achr8G33180_001
I
0.000
Pavir.Ab02693
Panicum virgatum
Pavir.Ab02693
N
0.000
BGIOSGA007247
Oryza indica
BGIOSGA007247
N
0.000
Pavir.Ab00172
Panicum virgatum
Pavir.Ab00172
N
0.000
Pavir.Ab00094
Panicum virgatum
Pavir.Ab00094
N
0.000
Pavir.Aa03509
Panicum virgatum
Pavir.Aa03509
N
0.000
Si018232m.g
Setaria italica
Si018232m.g
N
0.000
Sb04g001200
Sorghum bicolor
Sb04g001200
N
0.000
OS02G0116600
Oryza sativa
OS02G0116600
N
0.000
ORUFI02G01220
Oryza rufipogon
ORUFI02G01220
N
0.000
ORGLA02G0011200
Oryza glaberrima
ORGLA02G0011200
N
0.000
OPUNC02G00650
Oryza punctata
OPUNC02G00650
N
0.000
ONIVA02G01100
Oryza nivara
ONIVA02G01100
N
0.000
OMERI02G00630
Oryza meridionalis
OMERI02G00630
N
0.000
OLONG_000275
Oryza longistaminata
OLONG_000275
N
0.000
OGLUM02G01100
Oryza glumaepatula
OGLUM02G01100
N
0.000
OBART02G01220
Oryza barthii
OBART02G01220
N
0.000
LPERR02G01020
Leersia perrieri
LPERR02G01020
N
0.000
GRMZM5G856837
Zea mays
GRMZM5G856837
N
0.000
GRMZM2G314882
Zea mays
GRMZM2G314882
N
0.000