CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.1718s0014
(
Capsella grandiflora
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Cagra.1718s0014
T257685_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1718s0014.1.p
MADS box
12
63
KIQKKESRAVAFSQRRNGLYNKASQLCRLSGAEMAILTTPCSSSSHASFYSF
Links
Other
MADS box
family TFs
Other
Capsella grandiflora
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PITC_067530
Penicillium italicum
PITC_067530
I
0.000
HMPREF1541_10248
Cyphellophora europaea
HMPREF1541_10248
I
0.000
MCYG_06267
Microsporum canis
MCYG_06267
I
0.000
MGYG_06701
Microsporum gypseum
MGYG_06701
I
0.000
MPH_11572
Macrophomina phaseolina
MPH_11572
I
0.000
MYCFIDRAFT_55173
Pseudocercospora fijiensis
MYCFIDRAFT_55173
I
0.000
Mycgr3G29802
Zymoseptoria tritici
Mycgr3G29802
I
0.000
PAAG_02792
Paracoccidioides sp lutzii
PAAG_02792
I
0.000
PABG_03262
Paracoccidioides brasiliensis
PABG_03262
I
0.000
PCH_Pc22g05320
Penicillium rubens
PCH_Pc22g05320
I
0.000
PDE_08526
Penicillium oxalicum
PDE_08526
I
0.000
PDIP_85960
Penicillium digitatum
PDIP_85960
I
0.000
PEX1_055470
Penicillium expansum
PEX1_055470
I
0.000
MCYG_06267
Arthroderma otae
MCYG_06267
I
0.000
PVAR5_8081
Byssochlamys spectabilis
PVAR5_8081
I
0.000
TEQG_07507
Trichophyton equinum
TEQG_07507
I
0.000
TESG_07008
Trichophyton tonsurans
TESG_07008
I
0.000
TRV_02685
Trichophyton verrucosum
TRV_02685
I
0.000
U727_00431750101
Penicillium solitum
U727_00431750101
I
0.000
UCRNP2_7184
Neofusicoccum parvum
UCRNP2_7184
I
0.000
V499_03042
Pseudogymnoascus pannorum
V499_03042
I
0.000
estExt_Genewise1Plus.C_11744
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_11744
I
0.000
gw1.1.4010.1
Mycosphaerella graminicola
gw1.1.4010.1
I
0.000
fgenesh1_pm.00009_#_398
Aspergillus carbonarius
fgenesh1_pm.00009_#_398
I
0.000
Pc22g05320
Penicillium chrysogenum
Pc22g05320
I
0.000
ARB_00435
Arthroderma benhamiae
ARB_00435
I
0.000
AFUA_4G12180
Aspergillus fumigatus
CADAFUAG00008297
I
0.000
CADANGAG00000740
Aspergillus niger
CADANGAG00000740
I
0.000
CADAFLAG00002200
Aspergillus flavus
CADAFLAG00002200
I
0.000
ACLA_051180
Aspergillus clavatus
CADACLAG00004893
I
0.000
BDDG_06836
Blastomyces dermatitidis
BDDG_06836
I
0.000
CADAORAG00001554
Aspergillus oryzae
CADAORAG00001554
I
0.000
ATEG_03850
Aspergillus terreus
CADATEAG00008925
I
0.000
NFIA_104080
Neosartorya fischeri
CADNFIAG00010223
I
0.000
DRE_02162
Drechslerella stenobrocha
DRE_02162
I
0.000
EURHEDRAFT_176010
Aspergillus ruber
EURHEDRAFT_176010
I
0.000
GMDG_00448
Pseudogymnoascus destructans
GMDG_00448
I
0.000
H101_02100
Trichophyton interdigitale
H101_02100
I
0.000
H105_01713
Trichophyton soudanense
H105_01713
I
0.000
H102_01697
Trichophyton rubrum
H102_01697
I
0.000
AOL_s00006g165
Arthrobotrys oligospora
AOL_s00006g165
N
0.000
estExt_Genewise1Plus.C_60333
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_60333
N
0.000
SNOG_07105
Stagonospora nodorum
SNOG_07105
N
0.000
W97_06726
Coniosporium apollinis
W97_06726
N
0.000
AUEXF2481DRAFT_43559
Aureobasidium subglaciale
AUEXF2481DRAFT_43559
N
0.000
BAUCODRAFT_144502
Baudoinia compniacensis
BAUCODRAFT_144502
N
0.000
AB07551.1
Alternaria brassicicola
AB07551.1
N
0.000
A1O3_09669
Capronia epimyces
A1O3_09669
N
0.000
SETTUDRAFT_165606
Setosphaeria turcica
SETTUDRAFT_165606
N
0.000
PV09_02615
Verruconis gallopava
PV09_02615
N
0.000
PTT_18631
Pyrenophora teres
PTT_18631
N
0.000
PTRG_00793
Pyrenophora triticirepentis
PTRG_00793
N
0.000
COCC4DRAFT_161072
Bipolaris maydis
COCC4DRAFT_161072
N
0.000
COCCADRAFT_8436
Bipolaris zeicola
COCCADRAFT_8436
N
0.000
COCSADRAFT_39203
Bipolaris sorokiniana
COCSADRAFT_39203
N
0.000
COCVIDRAFT_24280
Bipolaris victoriae
COCVIDRAFT_24280
N
0.000
OIDMADRAFT_53477
Oidiodendron maius
OIDMADRAFT_53477
N
0.000
DOTSEDRAFT_68803
Dothistroma septosporum
DOTSEDRAFT_68803
N
0.000
M438DRAFT_345659
Aureobasidium pullulans
M438DRAFT_345659
N
0.000
M437DRAFT_32680
Aureobasidium melanogenum
M437DRAFT_32680
N
0.000
LEMA_P055010.1
Leptosphaeria maculans
LEMA_P055010.1
N
0.000