CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.1772s0002
(
Capsella grandiflora
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Cagra.1772s0002
T257686_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1772s0002.1.p
MADS box
10
58
YIDNDSMRKATFNKRKKGFMKKIHELTVLCGIEACAVVYNPSNSTPEAW
Links
Other
MADS box
family TFs
Other
Capsella grandiflora
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TRIREDRAFT_60665
Trichoderma reesei
TRIREDRAFT_60665
N