evm.TU.contig_35265 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_35265 T258085_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.773 0.773
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_35265.1 MADS box 10 31

Links

Other MADS box family TFs
Other Carica papaya TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RBPJ Homo sapiens ENSG00000168214 D 0.000
TRE_0000568701 Trichobilharzia regenti TRE_0000568701 I 0.000
Sjc_0108400 Schistosoma japonicum Sjc_0108400 I 0.000
D915_08967 Fasciola hepatica D915_08967 I 0.000
ENSVPAG00000005031 Vicugna pacos ENSVPAG00000005031 I 0.000
SCUD_0000326701 Schistosoma curassoni SCUD_0000326701 I 0.000
SMRZ_0000802101 Schistosoma margrebowiei SMRZ_0000802101 I 0.000
SMTD_0001089601 Schistosoma mattheei SMTD_0001089601 I 0.000
estExt_Genewise1Plus.C_11539 Heterobasidion annosum estExt_Genewise1Plus.C_11539 N 0.000
MPER_06363 Moniliophthora perniciosa MPER_06363 N 0.000
fgenesh1_pg.C_scaffold_11000203 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_11000203 N 0.000
SERLA73DRAFT_174218 Serpula lacrymans SERLA73DRAFT_174218 N 0.000
SCLCIDRAFT_110688 Scleroderma citrinum SCLCIDRAFT_110688 N 0.000
SCHCODRAFT_13378 Schizophyllum commune SCHCODRAFT_13378 N 0.000
PLEOSDRAFT_1054066 Pleurotus ostreatus PLEOSDRAFT_1054066 N 0.000
PISMIDRAFT_646612 Pisolithus microcarpus PISMIDRAFT_646612 N 0.000
PILCRDRAFT_827282 Piloderma croceum PILCRDRAFT_827282 N 0.000
PHLGIDRAFT_17608 Phlebiopsis gigantea PHLGIDRAFT_17608 N 0.000
PHACADRAFT_190379 Phanerochaete carnosa PHACADRAFT_190379 N 0.000
JAAARDRAFT_119629 Jaapia argillacea JAAARDRAFT_119629 N 0.000
BN946_scf185013.g146 Trametes cinnabarina BN946_scf185013.g146 N 0.000
CC1G_13688 Coprinopsis cinerea CC1G_13688 N 0.000
CERSUDRAFT_110536 Ceriporiopsis subvermispora CERSUDRAFT_110536 N 0.000
CY34DRAFT_22011 Suillus luteus CY34DRAFT_22011 N 0.000
FIBRA_00291 Fibroporia radiculosa FIBRA_00291 N 0.000
GALMADRAFT_83961 Galerina marginata GALMADRAFT_83961 N 0.000
GLOTRDRAFT_52937 Gloeophyllum trabeum GLOTRDRAFT_52937 N 0.000
HETIRDRAFT_437891 Heterobasidion irregulare HETIRDRAFT_437891 N 0.000
PAXRUDRAFT_23347 Paxillus rubicundulus PAXRUDRAFT_23347 N 0.000
K443DRAFT_673333 Laccaria amethystina K443DRAFT_673333 N 0.000
LACBIDRAFT_300968 Laccaria bicolor LACBIDRAFT_300968 N 0.000
M378DRAFT_115389 Amanita muscaria M378DRAFT_115389 N 0.000
M404DRAFT_134267 Pisolithus tinctorius M404DRAFT_134267 N 0.000
M413DRAFT_22486 Hebeloma cylindrosporum M413DRAFT_22486 N 0.000
Moror_914 Moniliophthora roreri Moror_914 N 0.000
AGABI2DRAFT_114358 Agaricus bisporus AGABI2DRAFT_114358 N 0.000