evm.TU.contig_39415 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_39415 T258120_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_39415.1 MADS box 5 53

Links

Other MADS box family TFs
Other Carica papaya TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SBOR_8513 Sclerotinia borealis SBOR_8513 N
OIDMADRAFT_44672 Oidiodendron maius OIDMADRAFT_44672 N
OIDMADRAFT_96629 Oidiodendron maius OIDMADRAFT_96629 N
PABG_04230 Paracoccidioides brasiliensis PABG_04230 N
PV04_07248 Capronia semiimmersa PV04_07248 N
PV04_08544 Capronia semiimmersa PV04_08544 N
PV05_01157 Exophiala xenobiotica PV05_01157 N
PV06_08945 Exophiala oligosperma PV06_08945 N
PV07_01329 Cladophialophora immunda PV07_01329 N
PV08_09443 Exophiala spinifera PV08_09443 N
PV10_03696 Exophiala mesophila PV10_03696 N
PVAR5_3926 Byssochlamys spectabilis PVAR5_3926 N
OIDMADRAFT_130297 Oidiodendron maius OIDMADRAFT_130297 N
SS1G_10244 Sclerotinia sclerotiorum SS1G_10244 N
TEQG_08268 Trichophyton equinum TEQG_08268 N
TESG_07989 Trichophyton tonsurans TESG_07989 N
TRV_01335 Trichophyton verrucosum TRV_01335 N
UREG_04562 Uncinocarpus reesii UREG_04562 N
V499_05613 Pseudogymnoascus pannorum V499_05613 N
Z517_04760 Fonsecaea pedrosoi Z517_04760 N
Z517_09906 Fonsecaea pedrosoi Z517_09906 N
Z519_05622 Cladophialophora bantiana Z519_05622 N
Z519_07334 Cladophialophora bantiana Z519_07334 N
H101_04894 Trichophyton interdigitale H101_04894 N
A1O1_02135 Capronia coronata A1O1_02135 N
A1O5_08428 Cladophialophora psammophila A1O5_08428 N
A1O7_06825 Cladophialophora yegresii A1O7_06825 N
A1O7_08026 Cladophialophora yegresii A1O7_08026 N
A1O9_09960 Exophiala aquamarina A1O9_09960 N
ARB_01766 Arthroderma benhamiae ARB_01766 N
BDDG_03994 Blastomyces dermatitidis BDDG_03994 N
EPUS_05889 Endocarpon pusillum EPUS_05889 N
G647_03273 Cladophialophora carrionii G647_03273 N
G647_06990 Cladophialophora carrionii G647_06990 N
MCYG_02998 Microsporum canis MCYG_02998 N
H102_08792 Trichophyton rubrum H102_08792 N
H105_08817 Trichophyton soudanense H105_08817 N
HCBG_02977 Histoplasma capsulatum HCBG_02977 N
HMPREF1541_03890 Cyphellophora europaea HMPREF1541_03890 N
M7I_5908 Glarea lozoyensis M7I_5908 N
MBM_09971 Marssonina brunnea MBM_09971 N
MCYG_02998 Arthroderma otae MCYG_02998 N
MGYG_00173 Microsporum gypseum MGYG_00173 N
OIDMADRAFT_111681 Oidiodendron maius OIDMADRAFT_111681 N
OIDMADRAFT_112975 Oidiodendron maius OIDMADRAFT_112975 N