CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_1169.1
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.supercontig_1169.1
T258155_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_1169.1
MADS box
1
26
MKKVSELSSLYDVKAYTFIYSPNDSQ
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GMDG_01119
Pseudogymnoascus destructans
GMDG_01119
I
Z519_03796
Cladophialophora bantiana
Z519_03796
I
W97_00703
Coniosporium apollinis
W97_00703
I
VHEMI02386
Torrubiella hemipterigena
VHEMI02386
I
V499_08351
Pseudogymnoascus pannorum
V499_08351
I
TRIVIDRAFT_173998
Trichoderma virens
TRIVIDRAFT_173998
I
TRIREDRAFT_58130
Trichoderma reesei
TRIREDRAFT_58130
I
TRIATDRAFT_148632
Trichoderma atroviride
TRIATDRAFT_148632
I
THITE_2113068
Thielavia terrestris
THITE_2113068
I
SNOG_15057
Phaeosphaeria nodorum
SNOG_15057
I
PV06_10058
Exophiala oligosperma
PV06_10058
I
MAM_03651
Metarhizium album
MAM_03651
I
LEMA_P050050.1
Leptosphaeria maculans
LEMA_P050050.1
I
SNOG_15057
Stagonospora nodorum
SNOG_15057
I
FVEG_01436
Fusarium verticillioides
FVEG_01436
I
FPSE_01403
Fusarium pseudograminearum
FPSE_01403
I
FGRRES_01307
Fusarium graminearum
FGRRES_01307
I
A1O5_08857
Cladophialophora psammophila
A1O5_08857
I
ACRE_033680
Acremonium chrysogenum
ACRE_033680
I
BBA_08083
Beauveria bassiana
BBA_08083
I
CCM_01116
Cordyceps militaris
CCM_01116
I
CGGC5_8357
Colletotrichum gloeosporioides
CGGC5_8357
I
CH063_06329
Colletotrichum higginsianum
CH063_06329
I
CPUR_03208
Claviceps purpurea
CPUR_03208
I
FFUJ_01501
Fusarium fujikuroi
FFUJ_01501
I
FOXG_00080
Fusarium oxysporum
FOXG_00080
I
MYCTH_2088766
Myceliophthora thermophila
MYCTH_2088766
N
Cob_01730
Colletotrichum orbiculare
Cob_01730
N
M438DRAFT_372080
Aureobasidium pullulans
M438DRAFT_372080
N
M437DRAFT_84437
Aureobasidium melanogenum
M437DRAFT_84437
N
CFIO01_07294
Colletotrichum fioriniae
CFIO01_07294
N
CSUB01_10562
Colletotrichum sublineola
CSUB01_10562
N
UCRPA7_7634
Togninia minima
UCRPA7_7634
N
AUEXF2481DRAFT_24869
Aureobasidium subglaciale
AUEXF2481DRAFT_24869
N
VDAG_08823
Verticillium dahliae
VDAG_08823
N
VDBG_05122
Verticillium alfalfae
VDBG_05122
N
GLRG_03872
Colletotrichum graminicola
GLRG_03872
N
VDBG_05122
Verticillium albo atrum
VDBG_05122
N