evm.TU.supercontig_185.12 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.supercontig_185.12 T258190_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_185.12 MADS box 10 53

Links

Other MADS box family TFs
Other Carica papaya TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG01250 Caenorhabditis briggsae CBG01250 D
CBG01248 Caenorhabditis briggsae CBG01248 I
CJA16882 Caenorhabditis japonica CJA16882 I
CRE08754 Caenorhabditis remanei CRE08754 I
CRE08760 Caenorhabditis remanei CRE08760 I
nhr-184 Caenorhabditis elegans WBGene00018415 I
CBG01244 Caenorhabditis briggsae CBG01244 N
CBG01247 Caenorhabditis briggsae CBG01247 N
CBG26975 Caenorhabditis briggsae CBG26975 N
nhr-56 Caenorhabditis elegans WBGene00003646 N