CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_347.5
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.supercontig_347.5
T258233_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_347.5
MADS box
1
47
MENEASLQVTFSKHRSSLFKKTSELCTLCRPDVGLIVFSPGNRAFCY
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_01931
Capronia coronata
A1O1_01931
N
A1O5_06915
Cladophialophora psammophila
A1O5_06915
N
A1O7_05076
Cladophialophora yegresii
A1O7_05076
N
A1O9_13030
Exophiala aquamarina
A1O9_13030
N
G647_03586
Cladophialophora carrionii
G647_03586
N
HMPREF1541_08871
Cyphellophora europaea
HMPREF1541_08871
N
PV04_04136
Capronia semiimmersa
PV04_04136
N
PV05_02453
Exophiala xenobiotica
PV05_02453
N
PV07_04943
Cladophialophora immunda
PV07_04943
N
PV11_01942
Exophiala sideris
PV11_01942
N
Z517_06070
Fonsecaea pedrosoi
Z517_06070
N
Z519_06584
Cladophialophora bantiana
Z519_06584
N