CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.007G363700
(
Gossypium raimondii
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Gorai.007G363700
T258432_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.007G363700.1
MADS box
10
55
WISNDSARKVSLEKRRLGLMKKMNELTTLCGIRACLIIYSPNESEP
Links
Other
MADS box
family TFs
Other
Gossypium raimondii
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Usf1
Mus musculus
ENSMUSG00000026641
D
USF1
Homo sapiens
ENSG00000158773
D
ENSNLEG00000013935
Nomascus leucogenys
ENSNLEG00000013935
I
ENSAMEG00000015606
Ailuropoda melanoleuca
ENSAMEG00000015606
I
USF1
Monodelphis domestica
ENSMODG00000005443
I
USF1
Macaca mulatta
ENSMMUG00000002003
I
USF1
Myotis lucifugus
ENSMLUG00000009179
I
USF1
Microcebus murinus
ENSMICG00000007199
I
ENSMEUG00000009683
Macropus eugenii
ENSMEUG00000009683
I
USF1
Loxodonta africana
ENSLAFG00000011338
I
USF1
Gorilla gorilla
ENSGGOG00000003935
I
USF1
Felis catus
ENSFCAG00000012307
I
USF1
Equus caballus
ENSECAG00000004755
I
ARHGAP30
Dasypus novemcinctus
ENSDNOG00000005811
I
ENSCSAG00000002622
Chlorocebus sabaeus
ENSCSAG00000002622
I
USF1
Cavia porcellus
ENSCPOG00000003957
I
USF1
Callithrix jacchus
ENSCJAG00000005396
I
USF1
Choloepus hoffmanni
ENSCHOG00000011010
I
USF1
Canis familiaris
ENSCAFG00000012689
I
USF1
Bos taurus
ENSBTAG00000017873
I