Pavir.Bb01471 (Panicum virgatum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Pavir.Bb01471 T258864_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Bb01471.1.p MADS box 3 48

Links

Other MADS box family TFs
Other Panicum virgatum TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SAPIO_CDS10892 Scedosporium apiospermum SAPIO_CDS10892 I
PMAA_001790 Talaromyces marneffei PMAA_001790 N
PMAA_001790 Penicillium marneffei PMAA_001790 N
Z519_02061 Cladophialophora bantiana Z519_02061 N
Z518_04980 Rhinocladiella mackenziei Z518_04980 N
TSTA_099190 Talaromyces stipitatus TSTA_099190 N
PV10_01954 Exophiala mesophila PV10_01954 N
PV08_00876 Exophiala spinifera PV08_00876 N
PV07_06253 Cladophialophora immunda PV07_06253 N
PV06_05578 Exophiala oligosperma PV06_05578 N
PV06_00861 Exophiala oligosperma PV06_00861 N
PV05_09876 Exophiala xenobiotica PV05_09876 N
PV05_06583 Exophiala xenobiotica PV05_06583 N
A1O3_08818 Capronia epimyces A1O3_08818 N
M438DRAFT_363806 Aureobasidium pullulans M438DRAFT_363806 N
M437DRAFT_60050 Aureobasidium melanogenum M437DRAFT_60050 N
JL09_g1719 Pichia kudriavzevii JL09_g1719 N
H072_136 Dactylellina haptotyla H072_136 N
G647_01486 Cladophialophora carrionii G647_01486 N
EURHEDRAFT_417585 Aspergillus ruber EURHEDRAFT_417585 N
CADANGAG00007889 Aspergillus niger CADANGAG00007889 N
AFUA_2G15260 Aspergillus fumigatus CADAFUAG00004604 N
ACLA_074230 Aspergillus clavatus CADACLAG00006381 N
AUEXF2481DRAFT_701448 Aureobasidium subglaciale AUEXF2481DRAFT_701448 N
AUEXF2481DRAFT_234640 Aureobasidium subglaciale AUEXF2481DRAFT_234640 N