Pavir.Da01748 (Panicum virgatum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Pavir.Da01748 T258880_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Da01748.1.p MADS box 19 64

Links

Other MADS box family TFs
Other Panicum virgatum TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L893_g14196 Steinernema glaseri L893_g14196 N
MDOA007303 Musca domestica MDOA007303 N
ALUE_0000523001 Ascaris lumbricoides ALUE_0000523001 N
ANCCAN_02501 Ancylostoma caninum ANCCAN_02501 N
ANCCEY_04498 Ancylostoma ceylanicum ANCCEY_04498 N
ANCDUO_01800 Ancylostoma duodenale ANCDUO_01800 N
ASIM_0001023101 Anisakis simplex ASIM_0001023101 N
augustus_masked-nMf.1.1.scaf00776-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf00776-processed-gene-0.0 N
BTMF_0000819101 Brugia timori BTMF_0000819101 N
BXY_0681200 Bursaphelenchus xylophilus BXY_0681200 N
CGOC_0000560601 Cylicostephanus goldi CGOC_0000560601 N
D918_05751 Trichuris suis D918_05751 N
DICVIV_09521 Dictyocaulus viviparus DICVIV_09521 N
Hba_16068 Heterorhabditis bacteriophora Hba_16068 N
HPBE_0001925501 Heligmosomoides bakeri HPBE_0001925501 N
HPLM_0001120601 Haemonchus placei HPLM_0001120601 N
BGLB003107 Biomphalaria glabrata BGLB003107 N
L898_g11712 Steinernema monticolum L898_g11712 N
nAv.1.0.1.g03640 Acanthocheilonema viteae nAv.1.0.1.g03640 N
nDi.2.2.2.g01975 Dirofilaria immitis nDi.2.2.2.g01975 N
nLs.2.1.2.g02280 Litomosoides sigmodontis nLs.2.1.2.g02280 N
nOo.2.0.1.g06917 Onchocerca ochengi nOo.2.0.1.g06917 N
nOo.2.0.1.g07994 Onchocerca ochengi nOo.2.0.1.g07994 N
OFLC_0001322801 Onchocerca flexuosa OFLC_0001322801 N
PEQ_0000886501 Parascaris equorum PEQ_0000886501 N
scaffold58-EXSNAP2012.11 Pristionchus exspectatus scaffold58-EXSNAP2012.11 N
SVE_1689300 Strongyloides venezuelensis SVE_1689300 N
TCLT_0000816701 Thelazia callipaeda TCLT_0000816701 N
TCNE_0000027001 Toxocara canis TCNE_0000027001 N
TELCIR_13776 Teladorsagia circumcincta TELCIR_13776 N
TTRE_0000249801 Trichuris trichiura TTRE_0000249801 N
HelroG184094 Helobdella robusta HelroG184094 N
CpipJ_CPIJ018552 Culex pipiens CpipJ_CPIJ018552 N
WUBG_04923 Wuchereria bancrofti WUBG_04923 N
AAEL003558 Aedes aegypti AAEL003558 N
Bm12962 Brugia malayi Bm12962 N
CapteG215623 Capitella teleta CapteG215623 N
CBG25174 Caenorhabditis briggsae CBG25174 N
CBN28364 Caenorhabditis brenneri CBN28364 N
CBN28537 Caenorhabditis brenneri CBN28537 N
CGI_10012805 Crassostrea gigas CGI_10012805 N
CJA30884 Caenorhabditis japonica CJA30884 N
CJA40030 Caenorhabditis japonica CJA40030 N
CPIJ006385 Culex quinquefasciatus CPIJ006385 N
CPIJ018552 Culex quinquefasciatus CPIJ018552 N
EFV52452 Trichinella spiralis EFV52452 N
GM26798 Drosophila sechellia FBgn0181651 N
CpipJ_CPIJ006385 Culex pipiens CpipJ_CPIJ006385 N
LOAG_18302 Loa loa LOAG_18302 N
MESCA003372 Megaselia scalaris MESCA003372 N
PPA09748 Pristionchus pacificus PPA09748 N
RPRC014602 Rhodnius prolixus RPRC014602 N
WBGene00237282 Onchocerca volvulus WBGene00237282 N
LCUP009926 Lucilia cuprina LCUP009926 N
AARA001118 Anopheles arabiensis AARA001118 N
AATE005200 Anopheles atroparvus AATE005200 N
ACHR008953 Anopheles christyi ACHR008953 N
ACOM027781 Anopheles coluzzii ACOM027781 N
AMAM012119 Anopheles maculatus AMAM012119 N
AMEC001472 Anopheles melas AMEC001472 N
AMEM006409 Anopheles merus AMEM006409 N
AQUA008305 Anopheles quadriannulatus AQUA008305 N