Pavir.J14267 (Panicum virgatum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Pavir.J14267 T258952_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J14267.1.p MADS box 10 55

Links

Other MADS box family TFs
Other Panicum virgatum TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI07G24080 Oryza rufipogon ORUFI07G24080 I
Pavir.J36475 Panicum virgatum Pavir.J36475 I
Pavir.Bb03405 Panicum virgatum Pavir.Bb03405 I
Traes_2DS_9430AAD52 Triticum aestivum Traes_2DS_9430AAD52 I
Traes_2BS_F1B450FA4 Triticum aestivum Traes_2BS_F1B450FA4 I
Traes_2AS_1161E1D2E Triticum aestivum Traes_2AS_1161E1D2E I
Si029124m.g Setaria italica Si029124m.g I
Sb02g040050 Sorghum bicolor Sb02g040050 I
OS07G0627300 Oryza sativa OS07G0627300 I
BGIOSGA026188 Oryza indica BGIOSGA026188 I
ORGLA07G0179200 Oryza glaberrima ORGLA07G0179200 I
OPUNC07G21540 Oryza punctata OPUNC07G21540 I
OGLUM07G22980 Oryza glumaepatula OGLUM07G22980 I
OBART07G22930 Oryza barthii OBART07G22930 I
OB07G28520 Oryza brachyantha OB07G28520 I
LPERR07G19800 Leersia perrieri LPERR07G19800 I
GRMZM2G064630 Zea mays GRMZM2G064630 I
OMERI03G12240 Oryza meridionalis OMERI03G12240 N
TRIUR3_24509 Triticum urartu TRIUR3_24509 N