SapurV1A.0578s0120 (Salix purpurea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 SapurV1A.0578s0120 T259044_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL6
M06986_2.00
Arabidopsis thaliana
TTWCCHAAAAWRGWAANWW

WWNTTWCYWTTTTDGGWAA
Dap-seq
OMalley et al.(2016)
AGL6_col_a
1.000 1.000
MAD17_ORYSJ
M10961_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS17_01
1.000 1.000
MADS6
M10967_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS6_01
1.000 1.000
Q9ATF1_PETHY
M11013_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP9_01
0.979 0.979
O82699_MALDO
M11022_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS11_01
0.979 0.979
Q9ST54_MALDO
M11029_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS3_04
0.979 0.979
O82697_MALDO
M11020_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS7_01
0.979 0.979
SEP1
M02696_2.00
Arabidopsis thaliana
NDWNCCAWWWWTRGHAWB

VWTDCYAWWWWTGGNWHN
SELEX
Mathelier et al.(2014)
MA0584.1
0.958 0.958
SEP3
M08143_2.00
Arabidopsis thaliana
CCAAAAAWRGN

NCYWTTTTTGG
ChIP-seq
Mathelier et al.(2014)
MA0563.1
0.958 0.958
SEP1
M10929_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL2_01
0.958 0.958
SEP1
M10930_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL2_02
0.958 0.958
SEP3
M10902_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL9_01
0.958 0.958
AGL9_PETHY
M10993_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP2_01
0.958 0.958
Q9ATE6_PETHY
M11009_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP23_01
0.958 0.958
Q9ATF3_PETHY
M11015_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP4_01
0.958 0.958
O82084_MALDO
M11018_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS1_01
0.958 0.958
Q6UGQ8_PETHY
M11005_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS12_01
0.958 0.958
Q9LM09_TOBAC
M11016_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS4_01
0.958 0.958
MADS7
M10975_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS7_02
0.958 0.958
MADS8
M10976_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS8_01
0.958 0.958
Q9SBA6_MALDO
M11028_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS8_02
0.958 0.958
Q9LEH9_HORVU
M10983_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM9_01
0.938 0.938
Solyc05g012020.2
M10986_2.00
Solanum lycopersicum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$RIN_01
0.938 0.938
Solyc05g012020.2
M10987_2.00
Solanum lycopersicum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$RIN_Q2_01
0.938 0.938
Solyc05g012020.2
M10988_2.00
Solanum lycopersicum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$RIN_Q2
0.938 0.938
AGL3
M02693_2.00
Arabidopsis thaliana
VDWNCCAWWWWWRGNWNN

NNWNCYWWWWWTGGNWHB
SELEX
Mathelier et al.(2014)
MA0001.2
0.917 0.917
AGL3
M10908_2.00
Arabidopsis thaliana
VDWNCCAWWWWWRGNWNN

NNWNCYWWWWWTGGNWHB
Transfac
Matys et al.(2006)
P$AGL3_01
0.917 0.917
AGL3
M10909_2.00
Arabidopsis thaliana
NDTNCCAWWWWTRGHWNN

NNWDCYAWWWWTGGNAHN
Transfac
Matys et al.(2006)
P$AGL3_02
0.917 0.917
AGL3
M10910_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL3_03
0.917 0.917
SEP2
M10916_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL4_01
0.917 0.917
Q9ATF2_PETHY
M11014_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP5_01
0.917 0.917
MADS5
M10970_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS5_02
0.896 0.896
AGL13
M06989_2.00
Arabidopsis thaliana
WTWCYHAAAAWRGWAADW

WHTTWCYWTTTTDRGWAW
Dap-seq
OMalley et al.(2016)
AGL13_col_b
0.875 0.875
AG
M02695_2.00
Arabidopsis thaliana
HTTWCCWWAWNDGGHADN

NHTDCCHNWTWWGGWAAD
SELEX
Mathelier et al.(2014)
MA0005.2
0.875 0.875
AG
M10923_2.00
Arabidopsis thaliana
HTTWCCWWAWNDGGHWDN

NHTDCCHNWTWWGGWAAD
Transfac
Matys et al.(2006)
P$AG_01
0.875 0.875
AG
M10924_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AG_02
0.875 0.875
AG
M10925_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AG_03
0.875 0.875
AG_TOBAC
M10995_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AG1_02
0.875 0.875
AG
M10926_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AG_Q2
0.875 0.875
Q9LEI1_HORVU
M10984_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM7_01
0.875 0.875
Q9ATE3_PETHY
M11008_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP28_01
0.875 0.875
Q08711_PETHY
M10999_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP6_01
0.875 0.875
MADS1
M10969_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS1_02
0.875 0.875
MAD14_ORYSJ
M10960_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS14_01
0.875 0.875
MADS18
M10973_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS18_01
0.875 0.875
MADS3_ORYSJ
M10963_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS3_01
0.875 0.875
AG_PETHY
M10994_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS3_02
0.875 0.875
MADS50
M10968_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS50_01
0.875 0.875
Q84LI3_WHEAT
M10979_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAVRT1_01
0.875 0.875
O82128_WHEAT
M10965_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WAP1_01
0.875 0.875
squamosa
M02697_2.00
Antirrhinum majus
MYAWAWAWRGHAAN

NTTDCYWTWTWTRK
SELEX
Mathelier et al.(2014)
MA0082.1
0.854 0.854
AGL1
M02694_2.00
Arabidopsis thaliana
NDTDCCWWWWNDGGWAHN

NDTWCCHNWWWWGGHAHN
SELEX
Mathelier et al.(2014)
MA0585.1
0.854 0.854
SOC1
M08425_2.00
Arabidopsis thaliana
CCAAAAAWRGAAAND

HNTTTCYWTTTTTGG
ChIP-chip
Mathelier et al.(2014)
MA0554.1
0.854 0.854
AGL1
M10920_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL1_01
0.854 0.854
AGL1
M10921_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL1_02
0.854 0.854
SOC1
M10915_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL20_01
0.854 0.854
Q9LEI3_HORVU
M10985_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM3_01
0.854 0.854
MLOC_61901
M10964_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM8_01
0.854 0.854
Q9ATE8_PETHY
M11011_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP21_01
0.854 0.854
Q40591_TOBAC
M11002_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS1_03
0.854 0.854
Q8VWZ3_MALDO
M11025_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS14_02
0.854 0.854
MADS15
M10972_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS15_01
0.854 0.854
Q8VWZ2_MALDO
M11024_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS15_02
0.854 0.854
Q9FR84_MAIZE
M10981_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS3_03
0.854 0.854
SHP2
M10914_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SHP2_01
0.854 0.854
Q38742_ANTMA
M11000_2.00
Antirrhinum majus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SQUA_01
0.854 0.854
Q41829_MAIZE
M10977_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ZAP1_02
0.854 0.854
Q9ATE7_PETHY
M11010_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP22_01
0.833 0.833
O82698_MALDO
M11021_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS10_01
0.833 0.833
Q9ZRA5_MALDO
M11030_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS2_04
0.833 0.833
AGL42
M06995_2.00
Arabidopsis thaliana
RATGATG

CATCATY
Dap-seq
OMalley et al.(2016)
AGL42_col_a
0.812 0.812
AP1
M08144_2.00
Arabidopsis thaliana
MYAAAAAWRGAAA

TTTCYWTTTTTRK
ChIP-seq
Mathelier et al.(2014)
MA0940.1
0.812 0.812
Q40882_PETHY
M11003_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP11_01
0.812 0.812
Q9ATE9_PETHY
M11012_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP20_01
0.812 0.812
Q8GT99_TOBAC
M11006_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS11_02
0.812 0.812
O82695_MALDO
M11019_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS5_01
0.812 0.812
AP1
M10905_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADSA_Q2
0.812 0.812
Q9SBQ1_PETHY
M11017_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PFG_01
0.812 0.812
Q9ATE2_PETHY
M11007_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP29_01
0.792 0.792
Q43616_PETHY
M11004_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP7_01
0.792 0.792
Q7X9I6_MALDO
M11023_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS12_02
0.792 0.792
AGL15
M06992_2.00
Arabidopsis thaliana
WNTTWCCHAAWDWRGAAAN

NTTTCYWHWTTDGGWAANW
Dap-seq
OMalley et al.(2016)
AGL15_col_a
0.771 0.771
AGL15
M06993_2.00
Arabidopsis thaliana
DNTTWCCHAAWDDRGAAANHH

DDNTTTCYHHWTTDGGWAANH
Dap-seq
OMalley et al.(2016)
AGL15_colamp_a
0.771 0.771
SVP
M06984_2.00
Arabidopsis thaliana
DDCCVAAWANGGHAA

TTDCCNTWTTBGGHH
Dap-seq
OMalley et al.(2016)
SVP_colamp_v3b
0.771 0.771
SVP
M06985_2.00
Arabidopsis thaliana
CCMAAWANGGWAANW

WNTTWCCNTWTTKGG
Dap-seq
OMalley et al.(2016)
SVP_col_v3b
0.771 0.771
SVP
M08424_2.00
Arabidopsis thaliana
NWWHCCMAAAADGGAAARHH

DDYTTTCCHTTTTKGGDWWN
ChIP-chip
Mathelier et al.(2014)
MA0555.1
0.771 0.771
AGL15
M10927_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL15_01
0.771 0.771
AGL15
M10928_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL15_02
0.771 0.771
FBP24_PETHY
M10997_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP24_01
0.771 0.771
AGL16
M06987_2.00
Arabidopsis thaliana
TWCCHAAWDDGGWAA

TTWCCHHWTTDGGWA
Dap-seq
OMalley et al.(2016)
AGL16_col_a
0.750 0.750
AGL16
M06988_2.00
Arabidopsis thaliana
WDWNTTWCCHWAWWDGGAAAS

STTTCCHWWTWDGGWAANWHW
Dap-seq
OMalley et al.(2016)
AGL16_colamp_a
0.750 0.750
A1YJE4_HORVD
M10900_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM10_01
0.750 0.750
MADS2
M10966_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS2_02
0.750 0.750
FLC
M06990_2.00
Arabidopsis thaliana
WWDMYNDWWWWGGAAASW

WSTTTCCWWWWHNRKHWW
Dap-seq
OMalley et al.(2016)
AGL25_col_a
0.729 0.729
FLC
M06991_2.00
Arabidopsis thaliana
WCYHAAAAWGGAAAS

STTTCCWTTTTDRGW
Dap-seq
OMalley et al.(2016)
AGL25_colamp_a
0.729 0.729
FLC
M08147_2.00
Arabidopsis thaliana
NNWWDCYVAAAWWRGAAAVHH

DDBTTTCYWWTTTBRGHWWNN
ChIP-seq
Mathelier et al.(2014)
MA0558.1
0.729 0.729
Q40513_TOBAC
M11001_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DEF_01
0.729 0.729
FBP1_PETHY
M10996_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP1_01
0.729 0.729
M17_MAIZE
M10959_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$M17_01
0.729 0.729
Q9AR49_MAIZE
M10980_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$M29_01
0.729 0.729
AP3
M08146_2.00
Arabidopsis thaliana
WDCCMAAARWRGHAA

TTDCYWYTTTKGGHW
ChIP-seq
Mathelier et al.(2014)
MA0556.1
0.708 0.708
PI
M08148_2.00
Arabidopsis thaliana
MCMAAARWRGAAAR

YTTTCYWYTTTKGK
ChIP-seq
Mathelier et al.(2014)
MA0559.1
0.708 0.708
AGL12
M10906_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL12_01
0.708 0.708
MADS16
M10971_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS16_01
0.708 0.708
Q9FVN1_MAIZE
M10982_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS2_03
0.708 0.708
MAD55_ORYSJ
M10962_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS55_01
0.708 0.708
AP3
M10919_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADSB_Q2
0.708 0.708
Q4U0F1_WHEAT
M10978_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAVRT2_01
0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0578s0120.1.p MADS box 10 57
SapurV1A.0578s0120.2.p MADS box 10 57
SapurV1A.0578s0120.3.p MADS box 10 57
SapurV1A.0578s0120.4.p MADS box 10 57
SapurV1A.0578s0120.5.p MADS box 10 57

Links

Other MADS box family TFs
Other Salix purpurea TFs

2122 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZNF408 Myotis lucifugus ENSMLUG00000017629 N 0.000
Myotis_brandtii_ZNF408_10025512 Myotis brandtii Myotis_brandtii_ZNF408_10025512 N 0.000
ENSSTOG00000005114 Ictidomys tridecemlineatus ENSSTOG00000005114 N 0.000
ZNF408 Sus scrofa ENSSSCG00000023097 N 0.000
ZNF408 Pteropus vampyrus ENSPVAG00000015791 N 0.000
ZNF408 Pan troglodytes ENSPTRG00000003551 N 0.000
ENSPPYG00000003318 Pongo abelii ENSPPYG00000003318 N 0.000
ZNF408 Procavia capensis ENSPCAG00000014001 N 0.000
ENSPANG00000025797 Papio anubis ENSPANG00000025797 N 0.000
ZNF408 Ochotona princeps ENSOPRG00000009225 N 0.000
ZNF408 Otolemur garnettii ENSOGAG00000034080 N 0.000
ZNF408 Oryctolagus cuniculus ENSOCUG00000010953 N 0.000
ENSNLEG00000014132 Nomascus leucogenys ENSNLEG00000014132 N 0.000
ENSMPUG00000005490 Mustela putorius furo ENSMPUG00000005490 N 0.000
ZNF408 Macaca mulatta ENSMMUG00000019673 N 0.000
ENSAMEG00000006904 Ailuropoda melanoleuca ENSAMEG00000006904 N 0.000
ZNF408 Loxodonta africana ENSLAFG00000027848 N 0.000
ZNF408 Gorilla gorilla ENSGGOG00000010152 N 0.000
ZNF408 Homo sapiens ENSG00000175213 N 0.000
ZNF408 Felis catus ENSFCAG00000029105 N 0.000
ZNF408 Erinaceus europaeus ENSEEUG00000010466 N 0.000
ZNF408 Equus caballus ENSECAG00000010878 N 0.000
Zfp408 Dipodomys ordii ENSDORG00000000387 N 0.000
ZNF408 Dasypus novemcinctus ENSDNOG00000047669 N 0.000
ENSCSAG00000005681 Chlorocebus sabaeus ENSCSAG00000005681 N 0.000
ZNF408 Callithrix jacchus ENSCJAG00000019859 N 0.000
ZNF408 Choloepus hoffmanni ENSCHOG00000009909 N 0.000
ZNF408 Canis familiaris ENSCAFG00000009143 N 0.000
ZNF408 Bos taurus ENSBTAG00000027557 N 0.000