CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10019810m.g
(
Eutrema salsugineum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Thhalv10019810m.g
T259166_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AGL80
M06994_2.00
Arabidopsis thaliana
TCACCA
TGGTGA
Dap-seq
OMalley et al.(2016)
FEM111_col_a
0.702
0.702
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10019810m
MADS box
10
57
FIENNSSRKATYQKRKKGILKKVKEISTLCDVTACAIIYSPYTSNPDV
Links
Other
MADS box
family TFs
Other
Eutrema salsugineum
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ada-3
Neurospora crassa
NCU02896
D
0.000
CIMG_04610
Coccidioides immitis
CIMG_04610
I
0.000
MCYG_05794
Microsporum canis
MCYG_05794
I
0.000
SNOG_00466
Stagonospora nodorum
SNOG_00466
I
0.000
VDBG_09581
Verticillium albo atrum
VDBG_09581
I
0.000
A1O1_06649
Capronia coronata
A1O1_06649
I
0.000
A1O3_10484
Capronia epimyces
A1O3_10484
I
0.000
A1O5_10159
Cladophialophora psammophila
A1O5_10159
I
0.000
A1O7_01941
Cladophialophora yegresii
A1O7_01941
I
0.000
A1O9_06866
Exophiala aquamarina
A1O9_06866
I
0.000
ACRE_019440
Acremonium chrysogenum
ACRE_019440
I
0.000
ACRE_020490
Acremonium chrysogenum
ACRE_020490
I
0.000
ACRE_030130
Acremonium chrysogenum
ACRE_030130
I
0.000
ARB_01292
Arthroderma benhamiae
ARB_01292
I
0.000
AUEXF2481DRAFT_27177
Aureobasidium subglaciale
AUEXF2481DRAFT_27177
I
0.000
BAUCODRAFT_63686
Baudoinia compniacensis
BAUCODRAFT_63686
I
0.000
BBA_01669
Beauveria bassiana
BBA_01669
I
0.000
Bcin05g02960
Botrytis cinerea
Bcin05g02960
I
0.000
Bcin16g00320
Botrytis cinerea
Bcin16g00320
I
0.000
ACLA_030770
Aspergillus clavatus
CADACLAG00002327
I
0.000
AFUA_1G03800
Aspergillus fumigatus
CADAFUAG00009294
I
0.000
CADANGAG00014030
Aspergillus niger
CADANGAG00014030
I
0.000
ANIA_10504
Aspergillus nidulans
CADANIAG00004652
I
0.000
ATEG_03831
Aspergillus terreus
CADATEAG00008906
I
0.000
NFIA_020870
Neosartorya fischeri
CADNFIAG00001734
I
0.000
CCM_09011
Cordyceps militaris
CCM_09011
I
0.000
CFIO01_06708
Colletotrichum fioriniae
CFIO01_06708
I
0.000
CH063_12126
Colletotrichum higginsianum
CH063_12126
I
0.000
CHGG_02020
Chaetomium globosum
CHGG_02020
I
0.000
CMQ_5979
Grosmannia clavigera
CMQ_5979
I
0.000
Cob_07183
Colletotrichum orbiculare
Cob_07183
I
0.000
COCCADRAFT_98777
Bipolaris zeicola
COCCADRAFT_98777
I
0.000
COCMIDRAFT_5378
Bipolaris oryzae
COCMIDRAFT_5378
I
0.000
COCSADRAFT_142075
Bipolaris sorokiniana
COCSADRAFT_142075
I
0.000
COCVIDRAFT_97148
Bipolaris victoriae
COCVIDRAFT_97148
I
0.000
CPC735_071910
Coccidioides posadasii
CPC735_071910
I
0.000
CPUR_05074
Claviceps purpurea
CPUR_05074
I
0.000
CSUB01_10649
Colletotrichum sublineola
CSUB01_10649
I
0.000
DOTSEDRAFT_127076
Dothistroma septosporum
DOTSEDRAFT_127076
I
0.000
F503_07593
Ophiostoma piceae uamh
F503_07593
I
0.000
F503_08863
Ophiostoma piceae uamh
F503_08863
I
0.000
FFUJ_00433
Fusarium fujikuroi
FFUJ_00433
I
0.000
FFUJ_04592
Fusarium fujikuroi
FFUJ_04592
I
0.000
FFUJ_10471
Fusarium fujikuroi
FFUJ_10471
I
0.000
FGRRES_00800
Fusarium graminearum
FGRRES_00800
I
0.000
FGRRES_16250
Fusarium graminearum
FGRRES_16250
I
0.000
FGRRES_17664
Fusarium graminearum
FGRRES_17664
I
0.000
FOXG_01137
Fusarium oxysporum
FOXG_01137
I
0.000
FOXG_16650
Fusarium oxysporum
FOXG_16650
I
0.000
FPSE_09263
Fusarium pseudograminearum
FPSE_09263
I
0.000
FPSE_12020
Fusarium pseudograminearum
FPSE_12020
I
0.000
FPSE_12440
Fusarium pseudograminearum
FPSE_12440
I
0.000
FVEG_00379
Fusarium verticillioides
FVEG_00379
I
0.000
FVEG_13591
Fusarium verticillioides
FVEG_13591
I
0.000
G647_09757
Cladophialophora carrionii
G647_09757
I
0.000
GGTG_03334
Gaeumannomyces graminis
GGTG_03334
I
0.000
GLRG_00909
Colletotrichum graminicola
GLRG_00909
I
0.000
H101_06954
Trichophyton interdigitale
H101_06954
I
0.000
H105_02238
Trichophyton soudanense
H105_02238
I
0.000
HMPREF1120_04361
Exophiala dermatitidis
HMPREF1120_04361
I
0.000
HMPREF1541_07144
Cyphellophora europaea
HMPREF1541_07144
I
0.000
HMPREF1624_06736
Sporothrix schenckii
HMPREF1624_06736
I
0.000
HMPREF1624_08785
Sporothrix schenckii
HMPREF1624_08785
I
0.000
LEMA_P067510.1
Leptosphaeria maculans
LEMA_P067510.1
I
0.000
M437DRAFT_65869
Aureobasidium melanogenum
M437DRAFT_65869
I
0.000
M438DRAFT_32848
Aureobasidium pullulans
M438DRAFT_32848
I
0.000
MAC_05495
Metarhizium acridum
MAC_05495
I
0.000
MAJ_05922
Metarhizium majus
MAJ_05922
I
0.000
MAM_07411
Metarhizium album
MAM_07411
I
0.000
MANI_000308
Metarhizium anisopliae
MANI_000308
I
0.000
MAPG_01446
Magnaporthe poae
MAPG_01446
I
0.000
MBR_00159
Metarhizium brunneum
MBR_00159
I
0.000
MCYG_05794
Arthroderma otae
MCYG_05794
I
0.000
MGU_09666
Metarhizium guizhouense
MGU_09666
I
0.000
MGYG_02900
Microsporum gypseum
MGYG_02900
I
0.000
MPH_06231
Macrophomina phaseolina
MPH_06231
I
0.000
MPH_09781
Macrophomina phaseolina
MPH_09781
I
0.000
MYCFIDRAFT_36148
Pseudocercospora fijiensis
MYCFIDRAFT_36148
I
0.000
Mycgr3G33662
Zymoseptoria tritici
Mycgr3G33662
I
0.000
MYCTH_2307957
Myceliophthora thermophila
MYCTH_2307957
I
0.000
NechaG11213
Fusarium solani
NechaG11213
I
0.000
NechaG65901
Fusarium solani
NechaG65901
I
0.000
NechaG88015
Fusarium solani
NechaG88015
I
0.000
NechaG91416
Fusarium solani
NechaG91416
I
0.000
NEUTE1DRAFT_92483
Neurospora tetrasperma
NEUTE1DRAFT_92483
I
0.000
PCH_Pc16g08180
Penicillium rubens
PCH_Pc16g08180
I
0.000
PEX1_002120
Penicillium expansum
PEX1_002120
I
0.000
PFICI_03077
Pestalotiopsis fici
PFICI_03077
I
0.000
PITC_030780
Penicillium italicum
PITC_030780
I
0.000
PITC_068620
Penicillium italicum
PITC_068620
I
0.000
PMAA_055120
Talaromyces marneffei
PMAA_055120
I
0.000
PODANS_1_1340
Podospora anserina
PODANS_1_1340
I
0.000
PTRG_10316
Pyrenophora triticirepentis
PTRG_10316
I
0.000
PTT_13784
Pyrenophora teres
PTT_13784
I
0.000
PV04_02129
Capronia semiimmersa
PV04_02129
I
0.000
PV05_07659
Exophiala xenobiotica
PV05_07659
I
0.000
PV05_10700
Exophiala xenobiotica
PV05_10700
I
0.000
PV06_07997
Exophiala oligosperma
PV06_07997
I
0.000
PV07_02419
Cladophialophora immunda
PV07_02419
I
0.000
PV09_00486
Verruconis gallopava
PV09_00486
I
0.000
PV11_03531
Exophiala sideris
PV11_03531
I
0.000
S40285_01095
Stachybotrys chlorohalonata
S40285_01095
I
0.000
S40288_07746
Stachybotrys chartarum
S40288_07746
I
0.000
SAPIO_CDS1279
Scedosporium apiospermum
SAPIO_CDS1279
I
0.000
SBOR_5952
Sclerotinia borealis
SBOR_5952
I
0.000
SEPMUDRAFT_148059
Sphaerulina musiva
SEPMUDRAFT_148059
I
0.000
SETTUDRAFT_19016
Setosphaeria turcica
SETTUDRAFT_19016
I
0.000
SMAC_00550
Sordaria macrospora
SMAC_00550
I
0.000
SNOG_00466
Phaeosphaeria nodorum
SNOG_00466
I
0.000
SPBR_02264
Sporothrix brasiliensis
SPBR_02264
I
0.000
SPBR_06491
Sporothrix brasiliensis
SPBR_06491
I
0.000
SS1G_02138
Sclerotinia sclerotiorum
SS1G_02138
I
0.000
TEQG_00822
Trichophyton equinum
TEQG_00822
I
0.000
THITE_123221
Thielavia terrestris
THITE_123221
I
0.000
TRIATDRAFT_172200
Trichoderma atroviride
TRIATDRAFT_172200
I
0.000
TRIVIDRAFT_113147
Trichoderma virens
TRIVIDRAFT_113147
I
0.000
TRV_01165
Trichophyton verrucosum
TRV_01165
I
0.000
TSTA_017770
Talaromyces stipitatus
TSTA_017770
I
0.000
U727_00434000191
Penicillium solitum
U727_00434000191
I
0.000
UCREL1_10592
Eutypa lata
UCREL1_10592
I
0.000
UCREL1_7993
Eutypa lata
UCREL1_7993
I
0.000
UCRNP2_6697
Neofusicoccum parvum
UCRNP2_6697
I
0.000
UCRPA7_8612
Togninia minima
UCRPA7_8612
I
0.000
UREG_01815
Uncinocarpus reesii
UREG_01815
I
0.000
UV8b_5957
Ustilaginoidea virens
UV8b_5957
I
0.000
VDAG_04814
Verticillium dahliae
VDAG_04814
I
0.000
VDAG_06235
Verticillium dahliae
VDAG_06235
I
0.000
VDBG_09581
Verticillium alfalfae
VDBG_09581
I
0.000
VHEMI02844
Torrubiella hemipterigena
VHEMI02844
I
0.000
VHEMI05094
Torrubiella hemipterigena
VHEMI05094
I
0.000
X797_002513
Metarhizium robertsii
X797_002513
I
0.000
Z517_00016
Fonsecaea pedrosoi
Z517_00016
I
0.000
Z518_05417
Rhinocladiella mackenziei
Z518_05417
I
0.000
Z519_12694
Cladophialophora bantiana
Z519_12694
I
0.000
e_gw1.1.2059.1
Mycosphaerella graminicola
e_gw1.1.2059.1
I
0.000
e_gw1.9.518.1
Mycosphaerella fijiensis
e_gw1.9.518.1
I
0.000
estExt_Genewise1Plus.C_270154
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_270154
I
0.000
estExt_Genewise1Plus.C_40406
Neurospora discreta
estExt_Genewise1Plus.C_40406
I
0.000
estExt_Genewise1Plus.C_sca_1_chr1_3_01292
Nectria haematococca
estExt_Genewise1Plus.C_sca_1_chr1_3_01292
I
0.000
fgenesh1_pg.sca_76_chr13_2_0000013
Nectria haematococca
fgenesh1_pg.sca_76_chr13_2_0000013
I
0.000
fgenesh1_pm.sca_26_chr2_2_0000019
Nectria haematococca
fgenesh1_pm.sca_26_chr2_2_0000019
I
0.000
gw1.18.787.1
Nectria haematococca
gw1.18.787.1
I
0.000
AB00861.1
Alternaria brassicicola
AB00861.1
I
0.000
estExt_Genewise1Plus.C_41920
Cryphonectria parasitica
estExt_Genewise1Plus.C_41920
I
0.000
fgenesh1_pm.00129_#_214
Aspergillus carbonarius
fgenesh1_pm.00129_#_214
I
0.000
Pc16g08180
Penicillium chrysogenum
Pc16g08180
I
0.000
PMAA_055120
Penicillium marneffei
PMAA_055120
I
0.000