Thhalv10023871m.g (Eutrema salsugineum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Thhalv10023871m.g T259181_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL55
M06983_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
AGL55_col_a 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10023871m MADS box 12 64

Links

Other MADS box family TFs
Other Eutrema salsugineum TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh1_pm.00855_#_4 Aspergillus carbonarius fgenesh1_pm.00855_#_4 I
GMDG_04760 Pseudogymnoascus destructans GMDG_04760 I
CFIO01_12770 Colletotrichum fioriniae CFIO01_12770 I
FFUJ_08721 Fusarium fujikuroi FFUJ_08721 I
F503_06049 Ophiostoma piceae uamh F503_06049 I
MAPG_09245 Magnaporthe poae MAPG_09245 N
MAC_05754 Metarhizium acridum MAC_05754 N
MBR_06789 Metarhizium brunneum MBR_06789 N
MGG_07386 Magnaporthe oryzae MGG_07386 N
MGU_04577 Metarhizium guizhouense MGU_04577 N
OCS_03672 Ophiocordyceps sinensis OCS_03672 N
PEX1_086330 Penicillium expansum PEX1_086330 N
V499_00582 Pseudogymnoascus pannorum V499_00582 N
VDAG_07398 Verticillium dahliae VDAG_07398 N
VDBG_09240 Verticillium alfalfae VDBG_09240 N
X797_000005 Metarhizium robertsii X797_000005 N
Z517_05565 Fonsecaea pedrosoi Z517_05565 N
Z519_08249 Cladophialophora bantiana Z519_08249 N
MANI_026746 Metarhizium anisopliae MANI_026746 N
MAJ_06026 Metarhizium majus MAJ_06026 N
VDBG_09240 Verticillium albo atrum VDBG_09240 N
GLRG_11053 Colletotrichum graminicola GLRG_11053 N
GGTG_12739 Gaeumannomyces graminis GGTG_12739 N
G647_06217 Cladophialophora carrionii G647_06217 N
EURHEDRAFT_413664 Aspergillus ruber EURHEDRAFT_413664 N
CSUB01_08092 Colletotrichum sublineola CSUB01_08092 N
CH063_11411 Colletotrichum higginsianum CH063_11411 N
NFIA_092930 Neosartorya fischeri CADNFIAG00007525 N
AFUA_2G17511 Aspergillus fumigatus CADAFUAG00004564 N
ACLA_076400 Aspergillus clavatus CADACLAG00006786 N
A1O7_06316 Cladophialophora yegresii A1O7_06316 N
A1O5_05375 Cladophialophora psammophila A1O5_05375 N